Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=37)
REPEERHLDDAFFRGYKNLEPEAKAQLRKILDTFKKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7t5w-a1-m1-cD 37 37 1.0000 1.0000 1.0000 3.30e-21 7t5w-a1-m1-cA_7t5w-a1-m1-cD
2 7t5w-a1-m1-cA 35 35 0.9459 1.0000 1.0000 7.08e-20 7t5w-a1-m1-cA_7t5w-a1-m1-cD
3 7t5v-a1-m2-cA 34 33 0.8649 0.9412 0.9697 9.90e-18 7t5v-a1-m1-cA_7t5v-a1-m2-cA
4 7t5v-a1-m1-cA 34 33 0.8649 0.9412 0.9697 9.90e-18 7t5v-a1-m1-cA_7t5v-a1-m2-cA
5 3f6v-a1-m2-cA 96 28 0.3514 0.1354 0.4643 0.49 3f6v-a1-m1-cA_3f6v-a1-m2-cA
6 3f6v-a1-m1-cA 96 28 0.3514 0.1354 0.4643 0.49 3f6v-a1-m1-cA_3f6v-a1-m2-cA
7 3zu2-a1-m2-cA 415 22 0.2162 0.0193 0.3636 5.3 3zu2-a1-m1-cA_3zu2-a1-m2-cA
8 3zu2-a1-m1-cA 415 22 0.2162 0.0193 0.3636 5.3 3zu2-a1-m1-cA_3zu2-a1-m2-cA
9 3fkf-a1-m1-cD 136 32 0.2703 0.0735 0.3125 7.0 3fkf-a1-m1-cD_3fkf-a1-m1-cA, 3fkf-a1-m1-cD_3fkf-a1-m1-cB
10 3fkf-a1-m1-cB 140 32 0.2703 0.0714 0.3125 7.0 3fkf-a1-m1-cA_3fkf-a1-m1-cB, 3fkf-a1-m1-cD_3fkf-a1-m1-cB
11 3fkf-a1-m1-cA 140 32 0.2703 0.0714 0.3125 7.0 3fkf-a1-m1-cA_3fkf-a1-m1-cB, 3fkf-a1-m1-cD_3fkf-a1-m1-cA
12 1qki-a1-m1-cD 490 33 0.4054 0.0306 0.4545 9.2 1qki-a1-m1-cB_1qki-a1-m1-cD
13 1qki-a1-m1-cB 489 33 0.4054 0.0307 0.4545 9.3 1qki-a1-m1-cB_1qki-a1-m1-cD
14 5ukw-a1-m4-cA 476 33 0.4054 0.0315 0.4545 9.5 5ukw-a1-m1-cA_5ukw-a1-m4-cA
15 5ukw-a1-m1-cA 476 33 0.4054 0.0315 0.4545 9.5 5ukw-a1-m1-cA_5ukw-a1-m4-cA
16 6e07-a3-m1-cB 485 33 0.4054 0.0309 0.4545 9.5 6e07-a3-m1-cB_6e07-a3-m1-cN
17 6e07-a3-m1-cN 486 33 0.4054 0.0309 0.4545 9.6 6e07-a3-m1-cB_6e07-a3-m1-cN

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600