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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEV
RVYNWFANRRKEEAFRH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1lfb-a1-m2-cA 77 77 1.0000 1.0000 1.0000 5.87e-53 1lfb-a1-m1-cA_1lfb-a1-m2-cA
2 1lfb-a1-m1-cA 77 77 1.0000 1.0000 1.0000 5.87e-53 1lfb-a1-m1-cA_1lfb-a1-m2-cA
3 1ic8-a1-m1-cB 173 76 0.9870 0.4393 1.0000 9.43e-52 1ic8-a1-m1-cA_1ic8-a1-m1-cB
4 1ic8-a1-m1-cA 170 74 0.9610 0.4353 1.0000 3.92e-50 1ic8-a1-m1-cA_1ic8-a1-m1-cB
5 2h8r-a1-m1-cB 176 76 0.9091 0.3977 0.9211 1.27e-48 2h8r-a1-m1-cA_2h8r-a1-m1-cB
6 2h8r-a1-m1-cA 176 74 0.8831 0.3864 0.9189 5.63e-47 2h8r-a1-m1-cA_2h8r-a1-m1-cB
7 8dlc-a1-m2-cA 207 44 0.2208 0.0821 0.3864 0.10 8dlc-a1-m1-cA_8dlc-a1-m2-cA
8 8dlc-a1-m1-cA 207 44 0.2208 0.0821 0.3864 0.10 8dlc-a1-m1-cA_8dlc-a1-m2-cA
9 7dw5-a1-m1-cB 131 77 0.2727 0.1603 0.2727 5.3 7dw5-a1-m1-cA_7dw5-a1-m1-cB
10 7dw5-a1-m1-cA 131 77 0.2727 0.1603 0.2727 5.3 7dw5-a1-m1-cA_7dw5-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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