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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
RFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQQRAKDLENRQKKLEHANR
HLLLRVQELEMQAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fx5-a1-m1-cB 74 74 1.0000 1.0000 1.0000 1.09e-49 6fx5-a1-m1-cA_6fx5-a1-m1-cB
2 6fx5-a1-m1-cA 72 71 0.9595 0.9861 1.0000 3.85e-47 6fx5-a1-m1-cA_6fx5-a1-m1-cB
3 7d8t-a1-m1-cB 199 75 0.8919 0.3317 0.8800 1.66e-41 7d8t-a1-m1-cA_7d8t-a1-m1-cB
4 7d8t-a1-m1-cA 199 75 0.8919 0.3317 0.8800 1.66e-41 7d8t-a1-m1-cA_7d8t-a1-m1-cB
5 7eod-a2-m1-cD 69 67 0.8243 0.8841 0.9104 2.08e-39 7eod-a2-m1-cC_7eod-a2-m1-cD
6 7d8r-a2-m1-cD 174 73 0.8378 0.3563 0.8493 2.08e-36 7d8r-a2-m1-cC_7d8r-a2-m1-cD
7 7d8s-a2-m1-cD 175 75 0.8243 0.3486 0.8133 5.75e-35 7d8s-a2-m1-cD_7d8s-a2-m1-cC
8 7eod-a2-m1-cC 66 68 0.7838 0.8788 0.8529 1.20e-34 7eod-a2-m1-cC_7eod-a2-m1-cD
9 7d8s-a2-m1-cC 184 75 0.8108 0.3261 0.8000 1.78e-33 7d8s-a2-m1-cD_7d8s-a2-m1-cC
10 7y62-a1-m1-cA 74 72 0.6622 0.6622 0.6806 5.84e-30 7y62-a1-m1-cB_7y62-a1-m1-cA
11 7d8r-a2-m1-cC 168 73 0.7568 0.3333 0.7671 1.10e-29 7d8r-a2-m1-cC_7d8r-a2-m1-cD
12 7f09-a2-m1-cC 67 71 0.7297 0.8060 0.7606 1.14e-29 7f09-a2-m1-cD_7f09-a2-m1-cC
13 7f09-a2-m1-cD 65 71 0.7027 0.8000 0.7324 4.36e-28 7f09-a2-m1-cD_7f09-a2-m1-cC
14 7y62-a1-m1-cB 69 72 0.6216 0.6667 0.6389 2.90e-25 7y62-a1-m1-cB_7y62-a1-m1-cA
15 1am9-a1-m1-cD 76 43 0.2297 0.2237 0.3953 0.002 1am9-a1-m1-cD_1am9-a1-m1-cC
16 1am9-a1-m1-cC 82 43 0.2297 0.2073 0.3953 0.003 1am9-a1-m1-cD_1am9-a1-m1-cC
17 1ukl-a2-m1-cF 58 43 0.2297 0.2931 0.3953 0.084 1ukl-a2-m1-cE_1ukl-a2-m1-cF
18 1ukl-a2-m1-cE 58 43 0.2297 0.2931 0.3953 0.084 1ukl-a2-m1-cE_1ukl-a2-m1-cF
19 1a0a-a1-m1-cB 63 39 0.2027 0.2381 0.3846 0.10 1a0a-a1-m1-cA_1a0a-a1-m1-cB
20 1a0a-a1-m1-cA 63 39 0.2027 0.2381 0.3846 0.10 1a0a-a1-m1-cA_1a0a-a1-m1-cB
21 7f2f-a1-m1-cB 94 49 0.2432 0.1915 0.3673 0.21 7f2f-a1-m1-cA_7f2f-a1-m1-cB
22 1an4-a1-m1-cB 65 45 0.2297 0.2615 0.3778 0.31 1an4-a1-m1-cA_1an4-a1-m1-cB
23 1an4-a1-m1-cA 65 45 0.2297 0.2615 0.3778 0.31 1an4-a1-m1-cA_1an4-a1-m1-cB
24 7f2f-a1-m1-cA 90 50 0.2432 0.2000 0.3600 0.43 7f2f-a1-m1-cA_7f2f-a1-m1-cB
25 4esv-a2-m1-cK 421 37 0.1622 0.0285 0.3243 1.0 4esv-a2-m1-cJ_4esv-a2-m1-cK, 4esv-a2-m1-cL_4esv-a2-m1-cK
26 2vye-a1-m3-cB 380 37 0.1622 0.0316 0.3243 1.1 2vye-a1-m3-cB_2vye-a1-m2-cA, 2vye-a1-m3-cB_2vye-a1-m3-cA
27 2vye-a1-m3-cA 424 37 0.1622 0.0283 0.3243 1.1 2vye-a1-m3-cB_2vye-a1-m3-cA
28 2vye-a1-m2-cA 424 37 0.1622 0.0283 0.3243 1.1 2vye-a1-m3-cB_2vye-a1-m2-cA
29 4esv-a2-m1-cG 421 37 0.1622 0.0285 0.3243 1.1 4esv-a2-m1-cG_4esv-a2-m1-cH, 4esv-a2-m1-cL_4esv-a2-m1-cG
30 4esv-a2-m1-cL 419 37 0.1622 0.0286 0.3243 1.1 4esv-a2-m1-cL_4esv-a2-m1-cG, 4esv-a2-m1-cL_4esv-a2-m1-cK
31 4esv-a2-m1-cJ 416 37 0.1622 0.0288 0.3243 1.2 4esv-a2-m1-cJ_4esv-a2-m1-cK
32 4esv-a2-m1-cH 425 37 0.1622 0.0282 0.3243 1.2 4esv-a2-m1-cG_4esv-a2-m1-cH
33 2oqq-a2-m2-cB 42 20 0.1351 0.2381 0.5000 1.7 2oqq-a2-m1-cB_2oqq-a2-m2-cB, 2oqq-a2-m2-cA_2oqq-a2-m2-cB
34 2oqq-a2-m2-cA 42 20 0.1351 0.2381 0.5000 1.7 2oqq-a2-m1-cA_2oqq-a2-m2-cA, 2oqq-a2-m2-cA_2oqq-a2-m2-cB
35 2oqq-a2-m1-cB 42 20 0.1351 0.2381 0.5000 1.7 2oqq-a2-m1-cB_2oqq-a2-m2-cB
36 2oqq-a2-m1-cA 42 20 0.1351 0.2381 0.5000 1.7 2oqq-a2-m1-cA_2oqq-a2-m2-cA
37 3zvi-a1-m1-cB 415 36 0.1892 0.0337 0.3889 2.4 3zvi-a1-m1-cA_3zvi-a1-m1-cB
38 3zvi-a1-m1-cA 415 36 0.1892 0.0337 0.3889 2.4 3zvi-a1-m1-cA_3zvi-a1-m1-cB
39 6od3-a4-m1-cJ 52 45 0.1892 0.2692 0.3111 2.6 6od3-a4-m1-cJ_6od3-a4-m1-cI
40 1v9l-a1-m1-cF 418 37 0.1486 0.0263 0.2973 2.8 1v9l-a1-m1-cA_1v9l-a1-m1-cF, 1v9l-a1-m1-cE_1v9l-a1-m1-cF
41 1v9l-a1-m1-cE 418 37 0.1486 0.0263 0.2973 2.8 1v9l-a1-m1-cE_1v9l-a1-m1-cF
42 1v9l-a1-m1-cA 418 37 0.1486 0.0263 0.2973 2.8 1v9l-a1-m1-cA_1v9l-a1-m1-cF
43 6od5-a1-m1-cA 62 45 0.1892 0.2258 0.3111 3.3 6od5-a1-m1-cB_6od5-a1-m1-cA
44 6od5-a1-m1-cB 60 45 0.1892 0.2333 0.3111 3.8 6od5-a1-m1-cB_6od5-a1-m1-cA
45 6od3-a4-m1-cI 59 45 0.1892 0.2373 0.3111 3.9 6od3-a4-m1-cJ_6od3-a4-m1-cI
46 3u5v-a1-m2-cA 62 47 0.1892 0.2258 0.2979 6.2 3u5v-a1-m1-cA_3u5v-a1-m2-cA
47 3u5v-a1-m1-cA 62 47 0.1892 0.2258 0.2979 6.2 3u5v-a1-m1-cA_3u5v-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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