Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
RFPALLAELNDLLRGELSRLGVDPAHSLEIVVAICKHLGGGQVYIPRGQALDSLIRDLRI
WNDFNGRNVSELTTRYGVTFNTVYKAIRRMRRLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rr7-a2-m2-cA 94 94 1.0000 1.0000 1.0000 1.52e-65 1rr7-a2-m1-cA_1rr7-a2-m2-cA
2 1rr7-a2-m1-cA 94 94 1.0000 1.0000 1.0000 1.52e-65 1rr7-a2-m1-cA_1rr7-a2-m2-cA
3 6xy9-a1-m1-cA 303 63 0.2021 0.0627 0.3016 0.036 6xy9-a1-m1-cB_6xy9-a1-m1-cA
4 6xy9-a1-m1-cB 301 63 0.1915 0.0598 0.2857 0.096 6xy9-a1-m1-cB_6xy9-a1-m1-cA
5 7wkq-a2-m1-cC 194 78 0.2447 0.1186 0.2949 0.90 7wkq-a2-m1-cC_7wkq-a2-m2-cD
6 7wkq-a1-m1-cB 205 78 0.2553 0.1171 0.3077 0.98 7wkq-a1-m1-cB_7wkq-a1-m1-cA
7 7n7z-a1-m2-cA 396 25 0.1383 0.0328 0.5200 2.1 7n7z-a1-m2-cA_7n7z-a1-m2-cB
8 7n7z-a1-m1-cA 396 25 0.1383 0.0328 0.5200 2.1 7n7z-a1-m1-cA_7n7z-a1-m2-cB
9 7n7z-a1-m2-cB 399 25 0.1383 0.0326 0.5200 2.1 7n7z-a1-m1-cA_7n7z-a1-m2-cB, 7n7z-a1-m1-cB_7n7z-a1-m2-cB, 7n7z-a1-m2-cA_7n7z-a1-m2-cB
10 7n7z-a1-m1-cB 399 25 0.1383 0.0326 0.5200 2.1 7n7z-a1-m1-cB_7n7z-a1-m2-cB
11 7dbe-a1-m1-cD 329 51 0.2021 0.0578 0.3725 2.7 7dbe-a1-m1-cD_7dbe-a1-m1-cA
12 7dbe-a1-m1-cB 332 59 0.2021 0.0572 0.3220 3.6 7dbe-a1-m1-cA_7dbe-a1-m1-cB
13 5kin-a1-m1-cD 398 45 0.1489 0.0352 0.3111 3.6 5kin-a1-m1-cB_5kin-a1-m1-cD
14 5kin-a1-m1-cB 398 45 0.1489 0.0352 0.3111 3.6 5kin-a1-m1-cB_5kin-a1-m1-cD
15 3a2m-a1-m1-cA 298 39 0.1383 0.0436 0.3333 6.7 3a2m-a1-m1-cA_3a2m-a1-m1-cB
16 3a2m-a1-m1-cB 300 39 0.1383 0.0433 0.3333 6.7 3a2m-a1-m1-cA_3a2m-a1-m1-cB
17 7dbe-a1-m1-cA 330 40 0.1596 0.0455 0.3750 9.1 7dbe-a1-m1-cA_7dbe-a1-m1-cB, 7dbe-a1-m1-cD_7dbe-a1-m1-cA
18 6b40-a1-m1-cE 553 42 0.1596 0.0271 0.3571 9.2 6b40-a1-m1-cA_6b40-a1-m1-cE
19 6b40-a1-m1-cA 553 42 0.1596 0.0271 0.3571 9.2 6b40-a1-m1-cA_6b40-a1-m1-cE

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600