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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
RFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESE
KCQLQSQVEQLKLEVGRLAKERDLYKEKYEKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4eot-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.85e-60 4eot-a1-m1-cA_4eot-a1-m1-cB
2 4eot-a1-m1-cB 92 91 0.9891 0.9891 1.0000 5.37e-60 4eot-a1-m1-cA_4eot-a1-m1-cB
3 4auw-a1-m1-cA 87 86 0.7717 0.8161 0.8256 2.36e-44 4auw-a1-m1-cB_4auw-a1-m1-cA
4 4auw-a1-m1-cB 85 85 0.7609 0.8235 0.8235 1.07e-43 4auw-a1-m1-cB_4auw-a1-m1-cA
5 3a5t-a2-m1-cB 90 90 0.5652 0.5778 0.5778 2.13e-25 3a5t-a2-m1-cA_3a5t-a2-m1-cB
6 3a5t-a2-m1-cA 90 73 0.5000 0.5111 0.6301 6.58e-25 3a5t-a2-m1-cA_3a5t-a2-m1-cB
7 4kr7-a1-m1-cB 386 42 0.1413 0.0337 0.3095 6.3 4kr7-a1-m1-cA_4kr7-a1-m1-cB
8 4kr7-a1-m1-cA 386 42 0.1413 0.0337 0.3095 6.3 4kr7-a1-m1-cA_4kr7-a1-m1-cB
9 5gnj-a2-m1-cA 74 19 0.1087 0.1351 0.5263 9.2 5gnj-a2-m1-cA_5gnj-a2-m1-cB
10 5gnj-a2-m1-cB 77 19 0.1087 0.1299 0.5263 9.7 5gnj-a2-m1-cA_5gnj-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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