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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
RFSSAIAFIQWQGLSLEYRDRQGNWVIGYGHLTPDETLTFITPDQAEAFLLDDLNSCDIL
LQNCLPELNDRFQRETLIALFSIGHQRFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4evx-a4-m1-cA 92 89 1.0000 0.9674 1.0000 1.45e-62 4evx-a4-m2-cB_4evx-a4-m1-cA
2 4evx-a3-m1-cA 92 89 1.0000 0.9674 1.0000 1.45e-62 4evx-a3-m1-cB_4evx-a3-m1-cA
3 4evx-a2-m3-cA 92 89 1.0000 0.9674 1.0000 1.45e-62 4evx-a2-m1-cA_4evx-a2-m3-cA
4 4evx-a2-m1-cA 92 89 1.0000 0.9674 1.0000 1.45e-62 4evx-a2-m1-cA_4evx-a2-m3-cA, 4evx-a2-m3-cB_4evx-a2-m1-cA
5 4evx-a4-m2-cB 89 89 1.0000 1.0000 1.0000 1.75e-62 4evx-a4-m2-cB_4evx-a4-m1-cA
6 4evx-a3-m1-cB 89 89 1.0000 1.0000 1.0000 1.75e-62 4evx-a3-m1-cB_4evx-a3-m1-cA
7 4evx-a2-m3-cB 89 89 1.0000 1.0000 1.0000 1.75e-62 4evx-a2-m3-cB_4evx-a2-m1-cA
8 3sbb-a1-m4-cC 163 98 0.3258 0.1779 0.2959 0.31 3sbb-a1-m1-cC_3sbb-a1-m4-cC
9 3sbb-a1-m1-cC 163 98 0.3258 0.1779 0.2959 0.31 3sbb-a1-m1-cC_3sbb-a1-m4-cC
10 7mwz-a2-m1-cD 301 89 0.3034 0.0897 0.3034 0.32 7mwz-a2-m1-cD_7mwz-a2-m1-cC
11 4exm-a2-m1-cB 291 39 0.1573 0.0481 0.3590 0.58 4exm-a2-m1-cB_4exm-a2-m1-cC
12 8app-a1-m2-cD 188 86 0.2584 0.1223 0.2674 0.80 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m2-cD
13 8app-a1-m3-cA 187 86 0.2584 0.1230 0.2674 0.83 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m2-cD, 8app-a1-m3-cA_8app-a1-m4-cB
14 8app-a1-m4-cB 189 86 0.2584 0.1217 0.2674 0.86 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m4-cB, 8app-a1-m4-cB_8app-a1-m1-cC
15 8app-a1-m1-cC 190 86 0.2584 0.1211 0.2674 0.90 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m4-cB_8app-a1-m1-cC
16 7mwz-a2-m1-cC 349 63 0.2247 0.0573 0.3175 2.0 7mwz-a2-m1-cD_7mwz-a2-m1-cC
17 1an4-a1-m1-cB 65 33 0.0899 0.1231 0.2424 2.4 1an4-a1-m1-cA_1an4-a1-m1-cB
18 1an4-a1-m1-cA 65 33 0.0899 0.1231 0.2424 2.4 1an4-a1-m1-cA_1an4-a1-m1-cB
19 1ylo-a1-m2-cF 334 69 0.2247 0.0599 0.2899 2.5 1ylo-a1-m1-cB_1ylo-a1-m2-cF, 1ylo-a1-m2-cE_1ylo-a1-m2-cF
20 1ylo-a1-m2-cE 334 69 0.2247 0.0599 0.2899 2.5 1ylo-a1-m2-cE_1ylo-a1-m2-cF
21 1ylo-a1-m1-cB 334 69 0.2247 0.0599 0.2899 2.5 1ylo-a1-m1-cB_1ylo-a1-m2-cF
22 2hul-a1-m2-cA 164 64 0.2135 0.1159 0.2969 2.9 2hul-a1-m1-cA_2hul-a1-m2-cA
23 2hul-a1-m1-cA 164 64 0.2135 0.1159 0.2969 2.9 2hul-a1-m1-cA_2hul-a1-m2-cA
24 2huk-a1-m2-cA 164 64 0.2135 0.1159 0.2969 2.9 2huk-a1-m1-cA_2huk-a1-m2-cA
25 2huk-a1-m1-cA 164 64 0.2135 0.1159 0.2969 2.9 2huk-a1-m1-cA_2huk-a1-m2-cA
26 3sba-a1-m1-cC 162 64 0.2135 0.1173 0.2969 3.0 3sba-a1-m1-cC_3sba-a1-m1-cE
27 3sba-a1-m1-cF 163 64 0.2135 0.1166 0.2969 3.0 3sba-a1-m1-cD_3sba-a1-m1-cF
28 3sba-a1-m1-cE 163 64 0.2135 0.1166 0.2969 3.0 3sba-a1-m1-cC_3sba-a1-m1-cE
29 3sba-a1-m1-cD 163 64 0.2135 0.1166 0.2969 3.0 3sba-a1-m1-cD_3sba-a1-m1-cF
30 2qb0-a2-m1-cB 241 64 0.2135 0.0788 0.2969 3.1 2qb0-a2-m1-cC_2qb0-a2-m1-cB
31 1t8g-a2-m8-cA 158 60 0.1910 0.1076 0.2833 3.3 1t8g-a2-m1-cA_1t8g-a2-m8-cA, 1t8g-a2-m3-cA_1t8g-a2-m8-cA
32 1t8g-a2-m3-cA 158 60 0.1910 0.1076 0.2833 3.3 1t8g-a2-m3-cA_1t8g-a2-m8-cA
33 1t8g-a2-m1-cA 158 60 0.1910 0.1076 0.2833 3.3 1t8g-a2-m1-cA_1t8g-a2-m8-cA
34 3sb5-a2-m3-cA 164 64 0.2135 0.1159 0.2969 3.5 3sb5-a2-m2-cA_3sb5-a2-m3-cA
35 3sb5-a2-m2-cA 164 64 0.2135 0.1159 0.2969 3.5 3sb5-a2-m2-cA_3sb5-a2-m3-cA
36 4n9n-a1-m1-cB 417 93 0.3034 0.0647 0.2903 3.9 4n9n-a1-m1-cA_4n9n-a1-m1-cB
37 4n9n-a1-m1-cA 417 93 0.3034 0.0647 0.2903 3.9 4n9n-a1-m1-cA_4n9n-a1-m1-cB
38 5y3d-a1-m1-cA 479 31 0.1573 0.0292 0.4516 4.4 5y3d-a1-m1-cA_5y3d-a1-m1-cD
39 1m1j-a1-m1-cC 390 20 0.1236 0.0282 0.5500 5.9 1m1j-a1-m1-cF_1m1j-a1-m1-cC
40 3upf-a4-m2-cC 471 31 0.1573 0.0297 0.4516 5.9 3upf-a4-m1-cC_3upf-a4-m2-cC
41 3upf-a4-m1-cC 471 31 0.1573 0.0297 0.4516 5.9 3upf-a4-m1-cC_3upf-a4-m2-cC
42 1m1j-a1-m1-cF 389 20 0.1236 0.0283 0.5500 6.0 1m1j-a1-m1-cF_1m1j-a1-m1-cC
43 3uqs-a4-m1-cA 478 31 0.1573 0.0293 0.4516 6.0 3uqs-a4-m1-cA_3uqs-a4-m2-cB
44 5y3d-a1-m1-cD 479 31 0.1573 0.0292 0.4516 6.6 5y3d-a1-m1-cA_5y3d-a1-m1-cD, 5y3d-a1-m1-cB_5y3d-a1-m1-cD
45 5y3d-a1-m1-cE 483 31 0.1573 0.0290 0.4516 6.6 5y3d-a1-m1-cB_5y3d-a1-m1-cE
46 4djh-a2-m2-cA 447 63 0.2135 0.0425 0.3016 7.1 4djh-a2-m2-cA_4djh-a2-m1-cB
47 4djh-a1-m1-cA 447 63 0.2135 0.0425 0.3016 7.1 4djh-a1-m1-cA_4djh-a1-m1-cB
48 4djh-a2-m1-cB 448 63 0.2135 0.0424 0.3016 7.1 4djh-a2-m2-cA_4djh-a2-m1-cB
49 4djh-a1-m1-cB 448 63 0.2135 0.0424 0.3016 7.1 4djh-a1-m1-cA_4djh-a1-m1-cB
50 2hum-a1-m1-cB 164 61 0.2135 0.1159 0.3115 7.2 2hum-a1-m1-cA_2hum-a1-m1-cB
51 2hum-a1-m1-cA 164 61 0.2135 0.1159 0.3115 7.2 2hum-a1-m1-cA_2hum-a1-m1-cB
52 3fad-a2-m2-cA 164 22 0.1236 0.0671 0.5000 7.7 3fad-a2-m1-cA_3fad-a2-m2-cA
53 3fad-a2-m1-cA 164 22 0.1236 0.0671 0.5000 7.7 3fad-a2-m1-cA_3fad-a2-m2-cA
54 3oe8-a2-m1-cC 428 63 0.2135 0.0444 0.3016 8.1 3oe8-a2-m1-cB_3oe8-a2-m1-cC
55 4daj-a6-m1-cC 430 63 0.2135 0.0442 0.3016 8.1 4daj-a6-m1-cC_4daj-a6-m1-cD
56 3odu-a1-m1-cB 456 63 0.2135 0.0417 0.3016 8.2 3odu-a1-m1-cB_3odu-a1-m1-cA
57 3odu-a1-m1-cA 466 63 0.2135 0.0408 0.3016 8.2 3odu-a1-m1-cB_3odu-a1-m1-cA
58 3oe8-a2-m1-cB 426 63 0.2135 0.0446 0.3016 8.3 3oe8-a2-m1-cB_3oe8-a2-m1-cA, 3oe8-a2-m1-cB_3oe8-a2-m1-cC
59 3oe0-a1-m2-cA 433 63 0.2135 0.0439 0.3016 8.3 3oe0-a1-m1-cA_3oe0-a1-m2-cA
60 3oe0-a1-m1-cA 433 63 0.2135 0.0439 0.3016 8.3 3oe0-a1-m1-cA_3oe0-a1-m2-cA
61 3sb8-a1-m1-cB 164 22 0.1236 0.0671 0.5000 8.7 3sb8-a1-m1-cB_3sb8-a1-m1-cA
62 3sb7-a1-m3-cB 162 22 0.1236 0.0679 0.5000 8.8 3sb7-a1-m2-cB_3sb7-a1-m3-cB
63 3sb7-a1-m2-cB 162 22 0.1236 0.0679 0.5000 8.8 3sb7-a1-m2-cB_3sb7-a1-m3-cB
64 4daj-a6-m1-cD 432 63 0.2135 0.0440 0.3016 9.1 4daj-a6-m1-cC_4daj-a6-m1-cD
65 3oe8-a2-m1-cA 433 63 0.2135 0.0439 0.3016 9.1 3oe8-a2-m1-cB_3oe8-a2-m1-cA
66 3sb8-a1-m1-cA 165 22 0.1236 0.0667 0.5000 9.4 3sb8-a1-m1-cB_3sb8-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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