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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=18)
RGGGLCYCRRRFCVCVGR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mz6-a1-m1-cB 18 18 1.0000 1.0000 1.0000 6.51e-06 2mz6-a1-m1-cA_2mz6-a1-m1-cB
2 2mz6-a1-m1-cA 18 18 1.0000 1.0000 1.0000 6.51e-06 2mz6-a1-m1-cA_2mz6-a1-m1-cB
3 1zy6-a1-m1-cB 18 18 0.9444 0.9444 0.9444 7.30e-05 1zy6-a1-m1-cA_1zy6-a1-m1-cB
4 1zy6-a1-m1-cA 18 18 0.9444 0.9444 0.9444 7.30e-05 1zy6-a1-m1-cA_1zy6-a1-m1-cB
5 3uyk-a1-m1-cA 373 9 0.3333 0.0161 0.6667 6.1 3uyk-a1-m1-cB_3uyk-a1-m1-cA
6 3uyk-a1-m1-cB 369 9 0.3333 0.0163 0.6667 6.1 3uyk-a1-m1-cB_3uyk-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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