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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
RGSHLESYAFNKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKE
LEKVCNPIITKLYQSA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ud0-a4-m1-cD 76 76 1.0000 1.0000 1.0000 2.03e-51 1ud0-a4-m1-cD_1ud0-a4-m3-cA, 1ud0-a4-m1-cD_1ud0-a4-m3-cB
2 1ud0-a4-m3-cA 81 76 1.0000 0.9383 1.0000 2.80e-51 1ud0-a4-m1-cD_1ud0-a4-m3-cA, 1ud0-a4-m3-cA_1ud0-a4-m1-cC, 1ud0-a4-m3-cB_1ud0-a4-m3-cA
3 1ud0-a4-m1-cC 84 76 1.0000 0.9048 1.0000 2.80e-51 1ud0-a4-m3-cA_1ud0-a4-m1-cC
4 1ud0-a4-m3-cB 79 76 1.0000 0.9620 1.0000 3.08e-51 1ud0-a4-m1-cD_1ud0-a4-m3-cB, 1ud0-a4-m3-cB_1ud0-a4-m3-cA
5 2p32-a7-m1-cF 82 78 0.7632 0.7073 0.7436 4.35e-34 2p32-a7-m1-cA_2p32-a7-m1-cF, 2p32-a7-m1-cE_2p32-a7-m1-cF
6 2p32-a7-m1-cE 82 78 0.7632 0.7073 0.7436 4.35e-34 2p32-a7-m1-cE_2p32-a7-m1-cF
7 2p32-a7-m1-cA 82 78 0.7632 0.7073 0.7436 4.35e-34 2p32-a7-m1-cA_2p32-a7-m1-cF
8 4po2-a3-m2-cB 215 72 0.6579 0.2326 0.6944 4.22e-31 4po2-a3-m1-cB_4po2-a3-m2-cB, 4po2-a3-m2-cB_4po2-a3-m1-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
9 4po2-a3-m1-cB 215 72 0.6579 0.2326 0.6944 4.22e-31 4po2-a3-m1-cB_4po2-a3-m2-cB
10 4po2-a3-m2-cA 228 72 0.6579 0.2193 0.6944 5.87e-31 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
11 4po2-a3-m1-cA 228 72 0.6579 0.2193 0.6944 5.87e-31 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m1-cA
12 3lof-a3-m1-cE 81 72 0.6316 0.5926 0.6667 7.68e-30 3lof-a3-m1-cF_3lof-a3-m1-cE
13 3lof-a3-m1-cF 79 72 0.6316 0.6076 0.6667 1.10e-29 3lof-a3-m1-cF_3lof-a3-m1-cE
14 6asy-a1-m1-cB 606 69 0.4079 0.0512 0.4493 4.63e-10 6asy-a1-m1-cA_6asy-a1-m1-cB
15 6asy-a1-m1-cA 606 69 0.4079 0.0512 0.4493 4.63e-10 6asy-a1-m1-cA_6asy-a1-m1-cB
16 4fxs-a1-m4-cA 452 62 0.2105 0.0354 0.2581 0.74 4fxs-a1-m2-cA_4fxs-a1-m4-cA
17 4fxs-a1-m2-cA 452 62 0.2105 0.0354 0.2581 0.74 4fxs-a1-m2-cA_4fxs-a1-m4-cA
18 3ifs-a5-m2-cF 440 30 0.1579 0.0273 0.4000 5.1 3ifs-a5-m1-cF_3ifs-a5-m2-cF, 3ifs-a5-m2-cF_3ifs-a5-m2-cE
19 3ifs-a5-m1-cF 440 30 0.1579 0.0273 0.4000 5.1 3ifs-a5-m1-cF_3ifs-a5-m2-cF
20 3ifs-a5-m2-cE 441 30 0.1579 0.0272 0.4000 5.1 3ifs-a5-m2-cF_3ifs-a5-m2-cE

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Reference:
Jacob Schwartz et al.

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