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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
RGSHLESYAFNKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKE
LEKVCNPIITKLYQSAGGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ud0-a4-m3-cB 79 79 1.0000 1.0000 1.0000 2.93e-54 1ud0-a4-m1-cD_1ud0-a4-m3-cB, 1ud0-a4-m3-cB_1ud0-a4-m3-cA
2 1ud0-a4-m3-cA 81 79 1.0000 0.9753 1.0000 3.51e-54 1ud0-a4-m1-cD_1ud0-a4-m3-cA, 1ud0-a4-m3-cA_1ud0-a4-m1-cC, 1ud0-a4-m3-cB_1ud0-a4-m3-cA
3 1ud0-a4-m1-cC 84 79 1.0000 0.9405 1.0000 3.96e-54 1ud0-a4-m3-cA_1ud0-a4-m1-cC
4 1ud0-a4-m1-cD 76 76 0.9620 1.0000 1.0000 3.20e-51 1ud0-a4-m1-cD_1ud0-a4-m3-cA, 1ud0-a4-m1-cD_1ud0-a4-m3-cB
5 2p32-a7-m1-cF 82 78 0.7342 0.7073 0.7436 8.15e-34 2p32-a7-m1-cA_2p32-a7-m1-cF, 2p32-a7-m1-cE_2p32-a7-m1-cF
6 2p32-a7-m1-cE 82 78 0.7342 0.7073 0.7436 8.15e-34 2p32-a7-m1-cE_2p32-a7-m1-cF
7 2p32-a7-m1-cA 82 78 0.7342 0.7073 0.7436 8.15e-34 2p32-a7-m1-cA_2p32-a7-m1-cF
8 3lof-a3-m1-cE 81 74 0.6329 0.6173 0.6757 1.22e-31 3lof-a3-m1-cF_3lof-a3-m1-cE
9 4po2-a3-m2-cB 215 71 0.6329 0.2326 0.7042 1.07e-30 4po2-a3-m1-cB_4po2-a3-m2-cB, 4po2-a3-m2-cB_4po2-a3-m1-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
10 4po2-a3-m1-cB 215 71 0.6329 0.2326 0.7042 1.07e-30 4po2-a3-m1-cB_4po2-a3-m2-cB
11 4po2-a3-m2-cA 228 71 0.6329 0.2193 0.7042 1.56e-30 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
12 4po2-a3-m1-cA 228 71 0.6329 0.2193 0.7042 1.56e-30 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m1-cA
13 3lof-a3-m1-cF 79 72 0.6076 0.6076 0.6667 1.62e-29 3lof-a3-m1-cF_3lof-a3-m1-cE
14 6asy-a1-m1-cB 606 69 0.3924 0.0512 0.4493 4.54e-10 6asy-a1-m1-cA_6asy-a1-m1-cB
15 6asy-a1-m1-cA 606 69 0.3924 0.0512 0.4493 4.54e-10 6asy-a1-m1-cA_6asy-a1-m1-cB
16 4fxs-a1-m4-cA 452 62 0.2025 0.0354 0.2581 0.99 4fxs-a1-m2-cA_4fxs-a1-m4-cA
17 4fxs-a1-m2-cA 452 62 0.2025 0.0354 0.2581 0.99 4fxs-a1-m2-cA_4fxs-a1-m4-cA
18 1pyo-a1-m1-cB 98 57 0.2152 0.1735 0.2982 2.0 1pyo-a1-m1-cB_1pyo-a1-m1-cD
19 1pyo-a1-m1-cD 99 57 0.2152 0.1717 0.2982 2.1 1pyo-a1-m1-cB_1pyo-a1-m1-cD
20 3ifs-a5-m2-cF 440 42 0.1899 0.0341 0.3571 3.5 3ifs-a5-m1-cF_3ifs-a5-m2-cF, 3ifs-a5-m2-cF_3ifs-a5-m2-cE
21 3ifs-a5-m1-cF 440 42 0.1899 0.0341 0.3571 3.5 3ifs-a5-m1-cF_3ifs-a5-m2-cF
22 3ifs-a5-m2-cE 441 42 0.1899 0.0340 0.3571 3.6 3ifs-a5-m2-cF_3ifs-a5-m2-cE

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Reference:
Jacob Schwartz et al.

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