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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
RGTLNTKRFFNLDSAVYRPGKLDVKTKELMGLVASTVLRCDDCIRYHLVRCVQEGASDEE
IFEALDIALVVGGSIVIPHLRRAVGFLEELREMEKNG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1p8c-a1-m1-cE 119 97 1.0000 0.8151 1.0000 4.49e-68 1p8c-a1-m1-cC_1p8c-a1-m1-cE, 1p8c-a1-m1-cF_1p8c-a1-m1-cE
2 1p8c-a1-m1-cC 119 97 1.0000 0.8151 1.0000 4.49e-68 1p8c-a1-m1-cC_1p8c-a1-m1-cE
3 1vke-a1-m1-cA 117 97 1.0000 0.8291 1.0000 4.70e-68 1vke-a1-m1-cB_1vke-a1-m1-cA
4 1p8c-a1-m1-cF 115 97 1.0000 0.8435 1.0000 6.54e-68 1p8c-a1-m1-cF_1p8c-a1-m1-cE
5 1vke-a1-m1-cF 97 97 1.0000 1.0000 1.0000 9.38e-68 1vke-a1-m1-cF_1vke-a1-m1-cB
6 1vke-a1-m1-cB 101 96 0.9897 0.9505 1.0000 3.68e-67 1vke-a1-m1-cB_1vke-a1-m1-cA, 1vke-a1-m1-cF_1vke-a1-m1-cB
7 3bey-a1-m1-cE 86 50 0.1753 0.1977 0.3400 5.18e-04 3bey-a1-m1-cE_3bey-a1-m1-cA
8 3bey-a1-m1-cA 88 50 0.1753 0.1932 0.3400 5.43e-04 3bey-a1-m1-cE_3bey-a1-m1-cA
9 3bey-a1-m1-cF 91 50 0.1753 0.1868 0.3400 6.42e-04 3bey-a1-m1-cB_3bey-a1-m1-cF, 3bey-a1-m1-cC_3bey-a1-m1-cF, 3bey-a1-m1-cF_3bey-a1-m1-cD
10 3bey-a1-m1-cC 91 50 0.1753 0.1868 0.3400 6.42e-04 3bey-a1-m1-cC_3bey-a1-m1-cF
11 3bey-a1-m1-cD 93 50 0.1753 0.1828 0.3400 6.44e-04 3bey-a1-m1-cF_3bey-a1-m1-cD
12 3bey-a1-m1-cB 88 50 0.1753 0.1932 0.3400 6.64e-04 3bey-a1-m1-cB_3bey-a1-m1-cF
13 2af7-a2-m2-cH 115 50 0.2371 0.2000 0.4600 0.009 2af7-a2-m2-cB_2af7-a2-m2-cH, 2af7-a2-m2-cG_2af7-a2-m2-cH
14 2af7-a2-m2-cG 114 50 0.2371 0.2018 0.4600 0.009 2af7-a2-m1-cB_2af7-a2-m2-cG, 2af7-a2-m2-cB_2af7-a2-m2-cG, 2af7-a2-m2-cG_2af7-a2-m2-cH
15 2af7-a2-m2-cB 114 50 0.2371 0.2018 0.4600 0.009 2af7-a2-m2-cB_2af7-a2-m2-cG, 2af7-a2-m2-cB_2af7-a2-m2-cH
16 2af7-a2-m1-cB 114 50 0.2371 0.2018 0.4600 0.009 2af7-a2-m1-cB_2af7-a2-m2-cG
17 4tvo-a1-m1-cB 317 37 0.1340 0.0410 0.3514 0.97 4tvo-a1-m1-cB_4tvo-a1-m1-cA
18 2q0t-a1-m1-cC 247 58 0.1959 0.0769 0.3276 1.1 2q0t-a1-m1-cB_2q0t-a1-m1-cC
19 2q0t-a1-m1-cB 247 58 0.1959 0.0769 0.3276 1.1 2q0t-a1-m1-cB_2q0t-a1-m1-cC
20 4tvo-a1-m1-cA 328 37 0.1340 0.0396 0.3514 1.1 4tvo-a1-m1-cB_4tvo-a1-m1-cA
21 3d73-a1-m1-cB 119 41 0.1546 0.1261 0.3659 1.5 3d73-a1-m1-cA_3d73-a1-m1-cB
22 3d73-a1-m1-cA 119 41 0.1546 0.1261 0.3659 1.5 3d73-a1-m1-cA_3d73-a1-m1-cB
23 3cz1-a1-m1-cB 115 41 0.1546 0.1304 0.3659 1.6 3cz1-a1-m1-cB_3cz1-a1-m1-cA
24 3cz1-a1-m1-cA 117 41 0.1546 0.1282 0.3659 1.7 3cz1-a1-m1-cB_3cz1-a1-m1-cA
25 3bfb-a2-m2-cA 117 41 0.1546 0.1282 0.3659 1.7 3bfb-a2-m1-cA_3bfb-a2-m2-cA
26 3bfb-a2-m1-cA 117 41 0.1546 0.1282 0.3659 1.7 3bfb-a2-m1-cA_3bfb-a2-m2-cA
27 7cf6-a1-m2-cB 372 40 0.1546 0.0403 0.3750 2.4 7cf6-a1-m2-cB_7cf6-a1-m2-cA
28 3nzr-a2-m1-cD 236 71 0.2268 0.0932 0.3099 4.7 3nzr-a2-m1-cC_3nzr-a2-m1-cD
29 3nzr-a2-m1-cC 236 71 0.2268 0.0932 0.3099 4.7 3nzr-a2-m1-cC_3nzr-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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