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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
RGVNKVILIGNLGDKPELRYTGSGTAVCNMSLATNETYTDSDGNEVQNTEWHDVVAWGRL
GEICNEYLKKGSQVYFEGKLQTRSSTEVKAQEMMFLDSN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5odp-a1-m1-cA 99 99 1.0000 1.0000 1.0000 2.98e-71 5odp-a1-m1-cA_5odp-a1-m1-cG
2 5odp-a1-m1-cG 100 99 0.9798 0.9700 0.9798 8.61e-68 5odp-a1-m1-cA_5odp-a1-m1-cG
3 5odn-a1-m1-cE 105 103 0.9596 0.9048 0.9223 3.39e-65 5odn-a1-m1-cG_5odn-a1-m1-cE
4 5odn-a1-m1-cG 102 100 0.9495 0.9216 0.9400 1.26e-64 5odn-a1-m1-cG_5odn-a1-m1-cE
5 5odn-a1-m1-cF 105 107 0.9192 0.8667 0.8505 3.12e-59 5odn-a1-m1-cC_5odn-a1-m1-cF
6 5odn-a1-m1-cC 102 106 0.8687 0.8431 0.8113 2.33e-54 5odn-a1-m1-cC_5odn-a1-m1-cF
7 5odn-a1-m1-cD 106 106 0.8586 0.8019 0.8019 1.70e-53 5odn-a1-m1-cA_5odn-a1-m1-cD
8 5odn-a1-m1-cH 99 106 0.8485 0.8485 0.7925 1.15e-52 5odn-a1-m1-cA_5odn-a1-m1-cH
9 5odn-a1-m1-cA 99 106 0.8485 0.8485 0.7925 1.15e-52 5odn-a1-m1-cA_5odn-a1-m1-cD, 5odn-a1-m1-cA_5odn-a1-m1-cH
10 4mz9-a1-m1-cD 114 93 0.5152 0.4474 0.5484 2.03e-31 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
11 4mz9-a1-m1-cC 114 93 0.5152 0.4474 0.5484 2.03e-31 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
12 4mz9-a1-m1-cB 114 93 0.5152 0.4474 0.5484 2.03e-31 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
13 7f25-a1-m1-cB 106 92 0.5152 0.4811 0.5543 8.47e-30 7f25-a1-m1-cA_7f25-a1-m1-cB
14 7f25-a1-m1-cA 106 92 0.5152 0.4811 0.5543 8.47e-30 7f25-a1-m1-cA_7f25-a1-m1-cB
15 3tqy-a1-m1-cC 106 105 0.5354 0.5000 0.5048 1.07e-29 3tqy-a1-m1-cD_3tqy-a1-m1-cC
16 1sru-a1-m1-cD 101 87 0.4848 0.4752 0.5517 3.59e-29 1sru-a1-m1-cA_1sru-a1-m1-cD
17 1sru-a1-m1-cA 100 87 0.4848 0.4800 0.5517 3.64e-29 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
18 1sru-a1-m1-cC 96 87 0.4747 0.4896 0.5402 7.73e-27 1sru-a1-m1-cC_1sru-a1-m1-cA
19 1kaw-a1-m1-cD 96 92 0.4848 0.5000 0.5217 7.81e-27 1kaw-a1-m1-cC_1kaw-a1-m1-cD
20 1kaw-a1-m1-cC 96 92 0.4848 0.5000 0.5217 7.81e-27 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
21 1kaw-a1-m1-cA 96 92 0.4848 0.5000 0.5217 7.81e-27 1kaw-a1-m1-cA_1kaw-a1-m1-cC
22 3tqy-a1-m1-cD 96 104 0.5051 0.5208 0.4808 7.90e-27 3tqy-a1-m1-cD_3tqy-a1-m1-cC
23 3pgz-a1-m1-cB 114 84 0.4242 0.3684 0.5000 4.88e-23 3pgz-a1-m1-cA_3pgz-a1-m1-cB
24 3pgz-a1-m1-cA 109 83 0.4040 0.3670 0.4819 1.76e-21 3pgz-a1-m1-cA_3pgz-a1-m1-cB
25 2fxq-a1-m2-cA 197 98 0.3737 0.1878 0.3776 8.71e-20 2fxq-a1-m1-cA_2fxq-a1-m2-cA
26 2fxq-a1-m2-cA 197 80 0.3333 0.1675 0.4125 6.53e-11 2fxq-a1-m1-cA_2fxq-a1-m2-cA
27 2fxq-a1-m1-cA 197 98 0.3737 0.1878 0.3776 8.71e-20 2fxq-a1-m1-cA_2fxq-a1-m2-cA
28 2fxq-a1-m1-cA 197 80 0.3333 0.1675 0.4125 6.53e-11 2fxq-a1-m1-cA_2fxq-a1-m2-cA
29 6bhx-a1-m1-cA 98 102 0.4040 0.4082 0.3922 1.39e-18 6bhx-a1-m1-cA_6bhx-a1-m1-cC
30 3lgj-a1-m1-cB 97 82 0.3939 0.4021 0.4756 1.81e-17 3lgj-a1-m1-cA_3lgj-a1-m1-cB
31 3lgj-a1-m1-cA 95 89 0.4141 0.4316 0.4607 3.38e-17 3lgj-a1-m1-cA_3lgj-a1-m1-cB
32 6bhx-a1-m1-cC 102 106 0.3939 0.3824 0.3679 3.55e-17 6bhx-a1-m1-cA_6bhx-a1-m1-cC
33 2ihf-a1-m2-cA 205 107 0.3737 0.1805 0.3458 7.51e-17 2ihf-a1-m1-cA_2ihf-a1-m2-cA
34 2ihf-a1-m2-cA 205 91 0.3737 0.1805 0.4066 7.87e-11 2ihf-a1-m1-cA_2ihf-a1-m2-cA
35 2ihf-a1-m1-cA 205 107 0.3737 0.1805 0.3458 7.51e-17 2ihf-a1-m1-cA_2ihf-a1-m2-cA
36 2ihf-a1-m1-cA 205 91 0.3737 0.1805 0.4066 7.87e-11 2ihf-a1-m1-cA_2ihf-a1-m2-cA
37 3ulp-a1-m1-cA 114 85 0.3232 0.2807 0.3765 7.89e-17 3ulp-a1-m1-cD_3ulp-a1-m1-cA
38 6bhw-a2-m1-cG 101 105 0.3939 0.3861 0.3714 8.62e-17 6bhw-a2-m1-cE_6bhw-a2-m1-cG
39 3ulp-a1-m1-cC 116 85 0.3232 0.2759 0.3765 9.54e-17 3ulp-a1-m1-cD_3ulp-a1-m1-cC
40 3udg-a2-m1-cB 214 89 0.3535 0.1636 0.3933 1.04e-15 3udg-a2-m1-cB_3udg-a2-m1-cC
41 3udg-a2-m1-cB 214 104 0.3838 0.1776 0.3654 4.32e-07 3udg-a2-m1-cB_3udg-a2-m1-cC
42 6bhw-a2-m1-cE 99 104 0.3838 0.3838 0.3654 1.15e-15 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
43 3ulp-a1-m1-cB 114 85 0.3030 0.2632 0.3529 1.95e-15 3ulp-a1-m1-cD_3ulp-a1-m1-cB
44 7d8j-a1-m2-cB 98 99 0.3737 0.3776 0.3737 2.06e-15 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
45 3ulp-a1-m1-cD 113 85 0.3232 0.2832 0.3765 4.90e-15 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
46 2vw9-a1-m2-cB 105 77 0.3232 0.3048 0.4156 6.30e-15 2vw9-a1-m1-cB_2vw9-a1-m2-cB
47 2vw9-a1-m1-cB 105 77 0.3232 0.3048 0.4156 6.30e-15 2vw9-a1-m1-cB_2vw9-a1-m2-cB
48 6bhw-a2-m1-cF 96 103 0.3737 0.3854 0.3592 8.06e-15 6bhw-a2-m1-cF_6bhw-a2-m1-cE
49 3vdy-a1-m2-cB 97 96 0.3535 0.3608 0.3646 1.21e-14 3vdy-a1-m1-cB_3vdy-a1-m2-cB, 3vdy-a1-m2-cB_3vdy-a1-m1-cA
50 3vdy-a1-m1-cB 97 96 0.3535 0.3608 0.3646 1.21e-14 3vdy-a1-m1-cB_3vdy-a1-m2-cB
51 3vdy-a1-m1-cA 101 100 0.3636 0.3564 0.3600 1.57e-14 3vdy-a1-m2-cB_3vdy-a1-m1-cA
52 7d8j-a1-m2-cA 112 106 0.3737 0.3304 0.3491 3.51e-14 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
53 7d8j-a1-m1-cA 112 106 0.3737 0.3304 0.3491 3.51e-14 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
54 5xgt-a1-m1-cB 105 106 0.3535 0.3333 0.3302 1.44e-13 5xgt-a1-m1-cA_5xgt-a1-m1-cB
55 5xgt-a1-m1-cA 104 105 0.3535 0.3365 0.3333 1.49e-13 5xgt-a1-m1-cA_5xgt-a1-m1-cB
56 1se8-a1-m2-cA 205 99 0.3838 0.1854 0.3838 2.17e-13 1se8-a1-m1-cA_1se8-a1-m2-cA
57 1se8-a1-m2-cA 205 94 0.3737 0.1805 0.3936 1.70e-05 1se8-a1-m1-cA_1se8-a1-m2-cA
58 1se8-a1-m1-cA 205 99 0.3838 0.1854 0.3838 2.17e-13 1se8-a1-m1-cA_1se8-a1-m2-cA
59 1se8-a1-m1-cA 205 94 0.3737 0.1805 0.3936 1.70e-05 1se8-a1-m1-cA_1se8-a1-m2-cA
60 1z9f-a2-m4-cA 89 97 0.3636 0.4045 0.3711 1.39e-12 1z9f-a2-m1-cA_1z9f-a2-m4-cA, 1z9f-a2-m3-cA_1z9f-a2-m4-cA
61 1z9f-a2-m3-cA 89 97 0.3636 0.4045 0.3711 1.39e-12 1z9f-a2-m3-cA_1z9f-a2-m4-cA
62 1z9f-a2-m1-cA 89 97 0.3636 0.4045 0.3711 1.39e-12 1z9f-a2-m1-cA_1z9f-a2-m4-cA
63 3udg-a2-m1-cC 214 89 0.3434 0.1589 0.3820 1.38e-11 3udg-a2-m1-cB_3udg-a2-m1-cC
64 3udg-a2-m1-cC 214 105 0.3939 0.1822 0.3714 5.19e-08 3udg-a2-m1-cB_3udg-a2-m1-cC
65 1ue7-a1-m2-cA 106 92 0.3030 0.2830 0.3261 2.62e-11 1ue7-a1-m2-cB_1ue7-a1-m2-cA
66 1ue7-a1-m1-cA 106 92 0.3030 0.2830 0.3261 2.62e-11 1ue7-a1-m2-cB_1ue7-a1-m1-cA
67 3eiv-a3-m1-cC 111 87 0.3030 0.2703 0.3448 1.30e-10 3eiv-a3-m1-cD_3eiv-a3-m1-cC
68 2dud-a2-m2-cA 95 106 0.3434 0.3579 0.3208 1.91e-10 2dud-a2-m2-cB_2dud-a2-m2-cA
69 2dud-a2-m1-cA 95 106 0.3434 0.3579 0.3208 1.91e-10 2dud-a2-m2-cB_2dud-a2-m1-cA
70 3a5u-a1-m2-cA 118 92 0.3333 0.2797 0.3587 2.96e-10 3a5u-a1-m1-cA_3a5u-a1-m2-cA, 3a5u-a1-m2-cB_3a5u-a1-m2-cA
71 3a5u-a1-m1-cA 118 92 0.3333 0.2797 0.3587 2.96e-10 3a5u-a1-m1-cA_3a5u-a1-m2-cA
72 2dud-a2-m2-cB 92 106 0.3434 0.3696 0.3208 3.64e-10 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
73 1x3e-a1-m2-cB 119 90 0.3232 0.2689 0.3556 5.28e-10 1x3e-a1-m2-cA_1x3e-a1-m2-cB
74 1ue1-a1-m2-cB 119 90 0.3131 0.2605 0.3444 1.09e-09 1ue1-a1-m1-cB_1ue1-a1-m2-cB
75 1ue1-a1-m1-cB 119 90 0.3131 0.2605 0.3444 1.09e-09 1ue1-a1-m1-cB_1ue1-a1-m2-cB
76 7f5y-a1-m2-cB 120 90 0.3131 0.2583 0.3444 1.31e-09 7f5y-a1-m2-cA_7f5y-a1-m2-cB
77 3eiv-a3-m1-cD 100 84 0.2828 0.2800 0.3333 8.75e-09 3eiv-a3-m1-cD_3eiv-a3-m1-cC
78 3eiv-a1-m1-cD 100 84 0.2828 0.2800 0.3333 8.75e-09 3eiv-a1-m1-cA_3eiv-a1-m1-cD
79 7f5z-a1-m2-cA 117 90 0.3030 0.2564 0.3333 1.07e-08 7f5z-a1-m2-cA_7f5z-a1-m2-cB
80 3eiv-a2-m1-cA 98 81 0.2727 0.2755 0.3333 1.22e-08 3eiv-a2-m1-cA_3eiv-a2-m1-cB
81 3eiv-a1-m1-cA 98 81 0.2727 0.2755 0.3333 1.22e-08 3eiv-a1-m1-cA_3eiv-a1-m1-cD
82 7f5z-a1-m2-cB 118 91 0.3232 0.2712 0.3516 1.28e-08 7f5z-a1-m1-cB_7f5z-a1-m2-cB, 7f5z-a1-m2-cA_7f5z-a1-m2-cB
83 7f5z-a1-m1-cB 118 91 0.3232 0.2712 0.3516 1.28e-08 7f5z-a1-m1-cB_7f5z-a1-m2-cB
84 1x3e-a1-m2-cA 110 83 0.2828 0.2545 0.3373 2.13e-08 1x3e-a1-m1-cA_1x3e-a1-m2-cA, 1x3e-a1-m2-cA_1x3e-a1-m2-cB
85 1x3e-a1-m1-cA 110 83 0.2828 0.2545 0.3373 2.13e-08 1x3e-a1-m1-cA_1x3e-a1-m2-cA
86 1ue7-a1-m2-cB 98 93 0.2929 0.2959 0.3118 2.85e-08 1ue7-a1-m2-cB_1ue7-a1-m1-cA, 1ue7-a1-m2-cB_1ue7-a1-m2-cA
87 3eiv-a2-m1-cB 111 83 0.2727 0.2432 0.3253 3.54e-08 3eiv-a2-m1-cA_3eiv-a2-m1-cB
88 3a5u-a1-m2-cB 112 90 0.3030 0.2679 0.3333 5.90e-08 3a5u-a1-m2-cB_3a5u-a1-m2-cA
89 1ue7-a2-m3-cD 95 93 0.2929 0.3053 0.3118 1.34e-07 1ue7-a2-m1-cD_1ue7-a2-m3-cD
90 1ue7-a2-m1-cD 95 93 0.2929 0.3053 0.3118 1.34e-07 1ue7-a2-m1-cD_1ue7-a2-m3-cD
91 7f5y-a1-m2-cA 109 83 0.2727 0.2477 0.3253 2.25e-07 7f5y-a1-m2-cA_7f5y-a1-m2-cB
92 6hdz-a1-m1-cB 377 32 0.1515 0.0398 0.4688 3.5 6hdz-a1-m1-cB_6hdz-a1-m1-cA
93 6hdz-a1-m1-cA 421 32 0.1515 0.0356 0.4688 4.1 6hdz-a1-m1-cB_6hdz-a1-m1-cA
94 6sl4-a2-m2-cC 149 60 0.1818 0.1208 0.3000 8.8 6sl4-a2-m1-cC_6sl4-a2-m2-cC
95 6sl4-a2-m1-cC 149 60 0.1818 0.1208 0.3000 8.8 6sl4-a2-m1-cC_6sl4-a2-m2-cC
96 5gqo-a1-m2-cB 98 49 0.1717 0.1735 0.3469 9.9 5gqo-a1-m1-cB_5gqo-a1-m2-cB
97 5gqo-a1-m1-cB 98 49 0.1717 0.1735 0.3469 9.9 5gqo-a1-m1-cB_5gqo-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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