Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=96)
RGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTERTEWHRIAFFNRLAEIVGEYLR
KGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEHLD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3tqy-a1-m1-cD 96 96 1.0000 1.0000 1.0000 1.94e-67 3tqy-a1-m1-cD_3tqy-a1-m1-cC
2 3tqy-a1-m1-cC 106 106 1.0000 0.9057 0.9057 6.26e-64 3tqy-a1-m1-cD_3tqy-a1-m1-cC
3 4mz9-a1-m1-cD 114 102 0.6979 0.5877 0.6569 9.94e-47 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
4 4mz9-a1-m1-cC 114 102 0.6979 0.5877 0.6569 9.94e-47 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
5 4mz9-a1-m1-cB 114 102 0.6979 0.5877 0.6569 9.94e-47 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
6 1sru-a1-m1-cD 101 93 0.6875 0.6535 0.7097 1.07e-45 1sru-a1-m1-cA_1sru-a1-m1-cD
7 1sru-a1-m1-cA 100 93 0.6875 0.6600 0.7097 2.19e-45 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
8 1kaw-a1-m1-cD 96 92 0.6667 0.6667 0.6957 4.62e-45 1kaw-a1-m1-cC_1kaw-a1-m1-cD
9 1kaw-a1-m1-cC 96 92 0.6667 0.6667 0.6957 4.62e-45 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
10 1kaw-a1-m1-cA 96 92 0.6667 0.6667 0.6957 4.62e-45 1kaw-a1-m1-cA_1kaw-a1-m1-cC
11 7f25-a1-m1-cB 106 94 0.6771 0.6132 0.6915 2.51e-42 7f25-a1-m1-cA_7f25-a1-m1-cB
12 7f25-a1-m1-cA 106 94 0.6771 0.6132 0.6915 2.51e-42 7f25-a1-m1-cA_7f25-a1-m1-cB
13 1sru-a1-m1-cC 96 93 0.6562 0.6562 0.6774 1.78e-40 1sru-a1-m1-cC_1sru-a1-m1-cA
14 5odn-a1-m1-cD 106 95 0.5729 0.5189 0.5789 1.84e-37 5odn-a1-m1-cA_5odn-a1-m1-cD
15 3pgz-a1-m1-cA 109 98 0.6146 0.5413 0.6020 3.96e-36 3pgz-a1-m1-cA_3pgz-a1-m1-cB
16 5odn-a1-m1-cC 102 96 0.5729 0.5392 0.5729 7.24e-36 5odn-a1-m1-cC_5odn-a1-m1-cF
17 5odn-a1-m1-cH 99 95 0.5729 0.5556 0.5789 1.72e-35 5odn-a1-m1-cA_5odn-a1-m1-cH
18 5odn-a1-m1-cA 99 95 0.5729 0.5556 0.5789 1.72e-35 5odn-a1-m1-cA_5odn-a1-m1-cD, 5odn-a1-m1-cA_5odn-a1-m1-cH
19 3pgz-a1-m1-cB 114 103 0.6146 0.5175 0.5728 3.08e-35 3pgz-a1-m1-cA_3pgz-a1-m1-cB
20 5odn-a1-m1-cF 105 100 0.5729 0.5238 0.5500 3.79e-35 5odn-a1-m1-cC_5odn-a1-m1-cF
21 5odn-a1-m1-cE 105 104 0.5729 0.5238 0.5288 9.04e-33 5odn-a1-m1-cG_5odn-a1-m1-cE
22 5odn-a1-m1-cG 102 104 0.5625 0.5294 0.5192 3.95e-31 5odn-a1-m1-cG_5odn-a1-m1-cE
23 5odp-a1-m1-cA 99 104 0.5208 0.5051 0.4808 7.66e-27 5odp-a1-m1-cA_5odp-a1-m1-cG
24 5odp-a1-m1-cG 100 82 0.4688 0.4500 0.5488 6.29e-26 5odp-a1-m1-cA_5odp-a1-m1-cG
25 3lgj-a1-m1-cB 97 93 0.4896 0.4845 0.5054 6.27e-25 3lgj-a1-m1-cA_3lgj-a1-m1-cB
26 3lgj-a1-m1-cA 95 93 0.4688 0.4737 0.4839 8.21e-23 3lgj-a1-m1-cA_3lgj-a1-m1-cB
27 3ulp-a1-m1-cC 116 101 0.3750 0.3103 0.3564 6.58e-20 3ulp-a1-m1-cD_3ulp-a1-m1-cC
28 6bhw-a2-m1-cF 96 89 0.3854 0.3854 0.4157 2.49e-19 6bhw-a2-m1-cF_6bhw-a2-m1-cE
29 2dud-a2-m2-cB 92 93 0.4062 0.4239 0.4194 8.58e-19 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
30 3ulp-a1-m1-cD 113 99 0.3750 0.3186 0.3636 1.11e-18 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
31 3ulp-a1-m1-cB 114 100 0.3750 0.3158 0.3600 2.01e-18 3ulp-a1-m1-cD_3ulp-a1-m1-cB
32 6bhx-a1-m1-cC 102 90 0.3958 0.3725 0.4222 2.60e-18 6bhx-a1-m1-cA_6bhx-a1-m1-cC
33 6bhw-a2-m1-cG 101 93 0.4167 0.3960 0.4301 9.07e-18 6bhw-a2-m1-cE_6bhw-a2-m1-cG
34 6bhw-a2-m1-cE 99 91 0.4062 0.3939 0.4286 9.41e-18 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
35 3ulp-a1-m1-cA 114 101 0.3646 0.3070 0.3465 1.33e-17 3ulp-a1-m1-cD_3ulp-a1-m1-cA
36 2dud-a2-m2-cA 95 96 0.4062 0.4105 0.4062 6.30e-17 2dud-a2-m2-cB_2dud-a2-m2-cA
37 2dud-a2-m1-cA 95 96 0.4062 0.4105 0.4062 6.30e-17 2dud-a2-m2-cB_2dud-a2-m1-cA
38 7d8j-a1-m2-cA 112 97 0.3958 0.3393 0.3918 9.76e-17 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
39 7d8j-a1-m1-cA 112 97 0.3958 0.3393 0.3918 9.76e-17 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
40 2vw9-a1-m2-cB 105 87 0.3646 0.3333 0.4023 7.28e-15 2vw9-a1-m1-cB_2vw9-a1-m2-cB
41 2vw9-a1-m1-cB 105 87 0.3646 0.3333 0.4023 7.28e-15 2vw9-a1-m1-cB_2vw9-a1-m2-cB
42 2ihf-a1-m2-cA 205 101 0.4062 0.1902 0.3861 9.36e-15 2ihf-a1-m1-cA_2ihf-a1-m2-cA
43 2ihf-a1-m2-cA 205 79 0.3333 0.1561 0.4051 1.53e-10 2ihf-a1-m1-cA_2ihf-a1-m2-cA
44 2ihf-a1-m1-cA 205 101 0.4062 0.1902 0.3861 9.36e-15 2ihf-a1-m1-cA_2ihf-a1-m2-cA
45 2ihf-a1-m1-cA 205 79 0.3333 0.1561 0.4051 1.53e-10 2ihf-a1-m1-cA_2ihf-a1-m2-cA
46 6bhx-a1-m1-cA 98 90 0.3854 0.3776 0.4111 9.68e-15 6bhx-a1-m1-cA_6bhx-a1-m1-cC
47 5xgt-a1-m1-cA 104 97 0.3646 0.3365 0.3608 1.30e-14 5xgt-a1-m1-cA_5xgt-a1-m1-cB
48 5xgt-a1-m1-cB 105 97 0.3646 0.3333 0.3608 1.47e-14 5xgt-a1-m1-cA_5xgt-a1-m1-cB
49 3eiv-a2-m1-cB 111 96 0.3438 0.2973 0.3438 3.48e-14 3eiv-a2-m1-cA_3eiv-a2-m1-cB
50 7f5z-a1-m2-cA 117 101 0.3542 0.2906 0.3366 1.80e-13 7f5z-a1-m2-cA_7f5z-a1-m2-cB
51 1z9f-a2-m4-cA 89 89 0.3854 0.4157 0.4157 1.85e-13 1z9f-a2-m1-cA_1z9f-a2-m4-cA, 1z9f-a2-m3-cA_1z9f-a2-m4-cA
52 1z9f-a2-m3-cA 89 89 0.3854 0.4157 0.4157 1.85e-13 1z9f-a2-m3-cA_1z9f-a2-m4-cA
53 1z9f-a2-m1-cA 89 89 0.3854 0.4157 0.4157 1.85e-13 1z9f-a2-m1-cA_1z9f-a2-m4-cA
54 2fxq-a1-m2-cA 197 91 0.3750 0.1827 0.3956 1.97e-13 2fxq-a1-m1-cA_2fxq-a1-m2-cA
55 2fxq-a1-m2-cA 197 83 0.3646 0.1777 0.4217 2.20e-12 2fxq-a1-m1-cA_2fxq-a1-m2-cA
56 2fxq-a1-m1-cA 197 91 0.3750 0.1827 0.3956 1.97e-13 2fxq-a1-m1-cA_2fxq-a1-m2-cA
57 2fxq-a1-m1-cA 197 83 0.3646 0.1777 0.4217 2.20e-12 2fxq-a1-m1-cA_2fxq-a1-m2-cA
58 1x3e-a1-m2-cB 119 103 0.3542 0.2857 0.3301 3.02e-13 1x3e-a1-m2-cA_1x3e-a1-m2-cB
59 1x3e-a1-m2-cA 110 85 0.3333 0.2909 0.3765 3.56e-13 1x3e-a1-m1-cA_1x3e-a1-m2-cA, 1x3e-a1-m2-cA_1x3e-a1-m2-cB
60 1x3e-a1-m1-cA 110 85 0.3333 0.2909 0.3765 3.56e-13 1x3e-a1-m1-cA_1x3e-a1-m2-cA
61 7f5z-a1-m2-cB 118 101 0.3438 0.2797 0.3267 4.65e-13 7f5z-a1-m1-cB_7f5z-a1-m2-cB, 7f5z-a1-m2-cA_7f5z-a1-m2-cB
62 7f5z-a1-m1-cB 118 101 0.3438 0.2797 0.3267 4.65e-13 7f5z-a1-m1-cB_7f5z-a1-m2-cB
63 7f5y-a1-m2-cB 120 103 0.3438 0.2750 0.3204 8.88e-13 7f5y-a1-m2-cA_7f5y-a1-m2-cB
64 7d8j-a1-m2-cB 98 97 0.3750 0.3673 0.3711 1.05e-12 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
65 3vdy-a1-m1-cA 101 96 0.3333 0.3168 0.3333 1.76e-12 3vdy-a1-m2-cB_3vdy-a1-m1-cA
66 3a5u-a1-m2-cB 112 85 0.3333 0.2857 0.3765 2.52e-12 3a5u-a1-m2-cB_3a5u-a1-m2-cA
67 3udg-a2-m1-cC 214 97 0.3750 0.1682 0.3711 4.32e-12 3udg-a2-m1-cB_3udg-a2-m1-cC
68 3udg-a2-m1-cC 214 76 0.2812 0.1262 0.3553 6.79e-08 3udg-a2-m1-cB_3udg-a2-m1-cC
69 3udg-a2-m1-cB 214 96 0.3750 0.1682 0.3750 5.83e-12 3udg-a2-m1-cB_3udg-a2-m1-cC
70 3udg-a2-m1-cB 214 81 0.2917 0.1308 0.3457 7.66e-08 3udg-a2-m1-cB_3udg-a2-m1-cC
71 7f5y-a1-m2-cA 109 94 0.3333 0.2936 0.3404 6.29e-12 7f5y-a1-m2-cA_7f5y-a1-m2-cB
72 1ue7-a2-m3-cD 95 74 0.3021 0.3053 0.3919 6.82e-12 1ue7-a2-m1-cD_1ue7-a2-m3-cD
73 1ue7-a2-m1-cD 95 74 0.3021 0.3053 0.3919 6.82e-12 1ue7-a2-m1-cD_1ue7-a2-m3-cD
74 3a5u-a1-m2-cA 118 103 0.3542 0.2881 0.3301 3.27e-11 3a5u-a1-m1-cA_3a5u-a1-m2-cA, 3a5u-a1-m2-cB_3a5u-a1-m2-cA
75 3a5u-a1-m1-cA 118 103 0.3542 0.2881 0.3301 3.27e-11 3a5u-a1-m1-cA_3a5u-a1-m2-cA
76 1ue7-a1-m2-cB 98 74 0.2812 0.2755 0.3649 5.01e-11 1ue7-a1-m2-cB_1ue7-a1-m1-cA, 1ue7-a1-m2-cB_1ue7-a1-m2-cA
77 1ue1-a1-m2-cB 119 89 0.3021 0.2437 0.3258 9.79e-11 1ue1-a1-m1-cB_1ue1-a1-m2-cB
78 1ue1-a1-m1-cB 119 89 0.3021 0.2437 0.3258 9.79e-11 1ue1-a1-m1-cB_1ue1-a1-m2-cB
79 3vdy-a1-m2-cB 97 96 0.3229 0.3196 0.3229 1.32e-10 3vdy-a1-m1-cB_3vdy-a1-m2-cB, 3vdy-a1-m2-cB_3vdy-a1-m1-cA
80 3vdy-a1-m1-cB 97 96 0.3229 0.3196 0.3229 1.32e-10 3vdy-a1-m1-cB_3vdy-a1-m2-cB
81 3eiv-a2-m1-cA 98 69 0.2396 0.2347 0.3333 2.88e-10 3eiv-a2-m1-cA_3eiv-a2-m1-cB
82 3eiv-a1-m1-cA 98 69 0.2396 0.2347 0.3333 2.88e-10 3eiv-a1-m1-cA_3eiv-a1-m1-cD
83 1ue7-a1-m2-cA 106 79 0.3229 0.2925 0.3924 8.66e-10 1ue7-a1-m2-cB_1ue7-a1-m2-cA
84 1ue7-a1-m1-cA 106 79 0.3229 0.2925 0.3924 8.66e-10 1ue7-a1-m2-cB_1ue7-a1-m1-cA
85 1se8-a1-m2-cA 205 83 0.3438 0.1610 0.3976 1.32e-09 1se8-a1-m1-cA_1se8-a1-m2-cA
86 1se8-a1-m2-cA 205 34 0.1667 0.0780 0.4706 4.54e-06 1se8-a1-m1-cA_1se8-a1-m2-cA
87 1se8-a1-m1-cA 205 83 0.3438 0.1610 0.3976 1.32e-09 1se8-a1-m1-cA_1se8-a1-m2-cA
88 1se8-a1-m1-cA 205 34 0.1667 0.0780 0.4706 4.54e-06 1se8-a1-m1-cA_1se8-a1-m2-cA
89 3eiv-a3-m1-cD 100 74 0.2500 0.2400 0.3243 4.80e-09 3eiv-a3-m1-cD_3eiv-a3-m1-cC
90 3eiv-a1-m1-cD 100 74 0.2500 0.2400 0.3243 4.80e-09 3eiv-a1-m1-cA_3eiv-a1-m1-cD
91 3eiv-a3-m1-cC 111 86 0.3021 0.2613 0.3372 1.58e-08 3eiv-a3-m1-cD_3eiv-a3-m1-cC
92 6cqk-a1-m1-cB 93 67 0.1979 0.2043 0.2836 0.005 6cqk-a1-m1-cD_6cqk-a1-m1-cB
93 6cqk-a1-m1-cD 87 67 0.1979 0.2184 0.2836 0.028 6cqk-a1-m1-cD_6cqk-a1-m1-cB
94 6cqo-a1-m1-cA 93 32 0.1250 0.1290 0.3750 0.46 6cqo-a1-m1-cG_6cqo-a1-m1-cA
95 6cqo-a1-m1-cG 87 32 0.1250 0.1379 0.3750 0.56 6cqo-a1-m1-cG_6cqo-a1-m1-cA
96 5lvt-a2-m1-cD 91 66 0.1979 0.2088 0.2879 1.4 5lvt-a2-m1-cB_5lvt-a2-m1-cD
97 5lvt-a2-m1-cB 91 66 0.1979 0.2088 0.2879 1.4 5lvt-a2-m1-cB_5lvt-a2-m1-cD
98 4fdb-a1-m2-cA 92 48 0.1562 0.1630 0.3125 2.1 4fdb-a1-m1-cA_4fdb-a1-m2-cA
99 4fdb-a1-m1-cA 92 48 0.1562 0.1630 0.3125 2.1 4fdb-a1-m1-cA_4fdb-a1-m2-cA
100 5hei-a4-m1-cH 246 23 0.1042 0.0407 0.4348 3.1 5hei-a4-m1-cG_5hei-a4-m1-cH
101 5hei-a4-m1-cG 246 23 0.1042 0.0407 0.4348 3.1 5hei-a4-m1-cG_5hei-a4-m1-cH
102 6jhp-a1-m1-cD 716 14 0.1042 0.0140 0.7143 7.2 6jhp-a1-m1-cA_6jhp-a1-m1-cD, 6jhp-a1-m1-cB_6jhp-a1-m1-cD, 6jhp-a1-m1-cC_6jhp-a1-m1-cD
103 6jhp-a1-m1-cC 716 14 0.1042 0.0140 0.7143 7.2 6jhp-a1-m1-cC_6jhp-a1-m1-cD
104 6jhp-a1-m1-cB 716 14 0.1042 0.0140 0.7143 7.2 6jhp-a1-m1-cB_6jhp-a1-m1-cD
105 6jhp-a1-m1-cA 716 14 0.1042 0.0140 0.7143 7.2 6jhp-a1-m1-cA_6jhp-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600