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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
RKAARGRECQVRIPGVCNGNPETSVLAHIRKPPDLIATIACSACHDEIDRRTHFVDAGYA
KECALEGARTQVIWLKEGVI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3g27-a1-m2-cA 80 80 1.0000 1.0000 1.0000 2.13e-55 3g27-a1-m1-cA_3g27-a1-m2-cA
2 3g27-a1-m1-cA 80 80 1.0000 1.0000 1.0000 2.13e-55 3g27-a1-m1-cA_3g27-a1-m2-cA
3 3o9z-a1-m1-cD 309 38 0.2125 0.0550 0.4474 0.29 3o9z-a1-m1-cD_3o9z-a1-m1-cA
4 3oa0-a1-m1-cC 310 38 0.2125 0.0548 0.4474 0.29 3oa0-a1-m1-cD_3oa0-a1-m1-cC
5 3o9z-a1-m1-cA 310 38 0.2125 0.0548 0.4474 0.29 3o9z-a1-m1-cD_3o9z-a1-m1-cA
6 3oa0-a1-m1-cD 307 38 0.2125 0.0554 0.4474 0.31 3oa0-a1-m1-cD_3oa0-a1-m1-cC
7 1s9r-a1-m1-cB 409 45 0.2250 0.0440 0.4000 2.8 1s9r-a1-m1-cA_1s9r-a1-m1-cB
8 1s9r-a1-m1-cA 409 45 0.2250 0.0440 0.4000 2.8 1s9r-a1-m1-cA_1s9r-a1-m1-cB
9 3uqs-a4-m2-cB 482 62 0.2250 0.0373 0.2903 8.6 3uqs-a4-m1-cA_3uqs-a4-m2-cB

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Reference:
Jacob Schwartz et al.

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