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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
RKISDEECPVRKSQIFAGKWTLLIIFQINRRIIRYGELKRAIPGISEKLIDELKFLCGKG
LIKKKQYPEVPPRVEYSLTPLGEKVLPIIDEIAKFGENL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fsw-a1-m1-cB 100 99 1.0000 0.9900 1.0000 8.27e-67 2fsw-a1-m1-cA_2fsw-a1-m1-cB
2 2fsw-a1-m1-cA 99 99 1.0000 1.0000 1.0000 9.65e-67 2fsw-a1-m1-cA_2fsw-a1-m1-cB
3 7bze-a1-m2-cA 108 84 0.3333 0.3056 0.3929 1.10e-16 7bze-a1-m1-cA_7bze-a1-m2-cA
4 7bze-a1-m1-cA 108 84 0.3333 0.3056 0.3929 1.10e-16 7bze-a1-m1-cA_7bze-a1-m2-cA
5 7bzg-a3-m1-cJ 110 84 0.3333 0.3000 0.3929 1.22e-16 7bzg-a3-m1-cI_7bzg-a3-m1-cJ
6 7bzg-a3-m1-cI 110 84 0.3333 0.3000 0.3929 1.22e-16 7bzg-a3-m1-cI_7bzg-a3-m1-cJ
7 4a5m-a3-m1-cE 96 93 0.2929 0.3021 0.3118 9.68e-14 4a5m-a3-m1-cE_4a5m-a3-m1-cF
8 4a5m-a3-m1-cF 97 93 0.2929 0.2990 0.3118 1.06e-13 4a5m-a3-m1-cE_4a5m-a3-m1-cF
9 1yyv-a1-m1-cB 107 81 0.3333 0.3084 0.4074 4.97e-13 1yyv-a1-m1-cB_1yyv-a1-m1-cA
10 1yyv-a1-m1-cA 109 81 0.3333 0.3028 0.4074 5.32e-13 1yyv-a1-m1-cB_1yyv-a1-m1-cA
11 1z7u-a1-m1-cA 107 84 0.2929 0.2710 0.3452 8.94e-10 1z7u-a1-m1-cB_1z7u-a1-m1-cA
12 1z7u-a1-m1-cB 106 84 0.2929 0.2736 0.3452 9.14e-10 1z7u-a1-m1-cB_1z7u-a1-m1-cA
13 5hs8-a1-m2-cA 101 95 0.2727 0.2673 0.2842 4.13e-06 5hs8-a1-m1-cA_5hs8-a1-m2-cA
14 5hs8-a1-m1-cA 101 95 0.2727 0.2673 0.2842 4.13e-06 5hs8-a1-m1-cA_5hs8-a1-m2-cA
15 5hs7-a1-m1-cA 102 95 0.2727 0.2647 0.2842 4.43e-06 5hs7-a1-m1-cB_5hs7-a1-m1-cA
16 5hs7-a1-m1-cB 98 95 0.2727 0.2755 0.2842 4.43e-06 5hs7-a1-m1-cB_5hs7-a1-m1-cA
17 2hzt-a2-m1-cD 88 77 0.2525 0.2841 0.3247 4.39e-05 2hzt-a2-m1-cC_2hzt-a2-m1-cD
18 2hzt-a2-m1-cC 88 77 0.2525 0.2841 0.3247 4.39e-05 2hzt-a2-m1-cC_2hzt-a2-m1-cD
19 2f2e-a3-m3-cB 138 93 0.2424 0.1739 0.2581 0.020 2f2e-a3-m1-cB_2f2e-a3-m3-cB, 2f2e-a3-m3-cB_2f2e-a3-m3-cA
20 2f2e-a3-m1-cB 138 93 0.2424 0.1739 0.2581 0.020 2f2e-a3-m1-cB_2f2e-a3-m3-cB
21 2f2e-a2-m2-cB 138 93 0.2424 0.1739 0.2581 0.020 2f2e-a2-m1-cB_2f2e-a2-m2-cB
22 2f2e-a2-m1-cB 138 93 0.2424 0.1739 0.2581 0.020 2f2e-a2-m1-cB_2f2e-a2-m2-cB
23 2f2e-a3-m3-cA 140 93 0.2424 0.1714 0.2581 0.021 2f2e-a3-m3-cB_2f2e-a3-m3-cA
24 4gcv-a2-m1-cD 136 86 0.2121 0.1544 0.2442 0.63 4gcv-a2-m1-cC_4gcv-a2-m1-cD
25 4gcv-a2-m1-cC 136 86 0.2121 0.1544 0.2442 0.63 4gcv-a2-m1-cC_4gcv-a2-m1-cD
26 3bj6-a1-m1-cB 148 44 0.1717 0.1149 0.3864 2.8 3bj6-a1-m1-cB_3bj6-a1-m1-cA
27 3bj6-a1-m1-cA 149 44 0.1717 0.1141 0.3864 2.9 3bj6-a1-m1-cB_3bj6-a1-m1-cA
28 3bpv-a1-m2-cA 137 47 0.1515 0.1095 0.3191 2.9 3bpv-a1-m1-cA_3bpv-a1-m2-cA
29 3bpv-a1-m1-cA 137 47 0.1515 0.1095 0.3191 2.9 3bpv-a1-m1-cA_3bpv-a1-m2-cA
30 6abt-a1-m1-cB 98 33 0.1616 0.1633 0.4848 4.1 6abt-a1-m1-cA_6abt-a1-m1-cB
31 6abt-a1-m1-cA 98 33 0.1616 0.1633 0.4848 4.1 6abt-a1-m1-cA_6abt-a1-m1-cB
32 3e97-a1-m2-cA 218 27 0.1111 0.0505 0.4074 6.5 3e97-a1-m1-cA_3e97-a1-m2-cA
33 3e97-a1-m1-cA 218 27 0.1111 0.0505 0.4074 6.5 3e97-a1-m1-cA_3e97-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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