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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
RKPEVIITYCTQCQWLLRAAWLAQELLSTFSDDLGKVSLEPATGGAFRITCDGVQIWERK
ADGGFPEAKVLKQRVRDQIDPERDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2obk-a1-m1-cB 85 85 1.0000 1.0000 1.0000 8.83e-59 2obk-a1-m1-cA_2obk-a1-m1-cB
2 2obk-a1-m1-cA 84 84 0.9882 1.0000 1.0000 4.03e-58 2obk-a1-m1-cA_2obk-a1-m1-cB
3 2obk-a2-m1-cH 83 83 0.9765 1.0000 1.0000 2.64e-57 2obk-a2-m1-cE_2obk-a2-m1-cH
4 2obk-a2-m1-cE 80 80 0.9412 1.0000 1.0000 4.22e-55 2obk-a2-m1-cE_2obk-a2-m1-cH
5 2oka-a1-m1-cD 84 83 0.8588 0.8690 0.8795 2.35e-52 2oka-a1-m1-cA_2oka-a1-m1-cD, 2oka-a1-m1-cC_2oka-a1-m1-cD
6 2oka-a1-m1-cC 84 83 0.8588 0.8690 0.8795 2.35e-52 2oka-a1-m1-cC_2oka-a1-m1-cD
7 2oka-a1-m1-cA 84 83 0.8588 0.8690 0.8795 2.35e-52 2oka-a1-m1-cA_2oka-a1-m1-cD
8 2fa8-a1-m1-cB 86 84 0.6824 0.6744 0.6905 2.79e-37 2fa8-a1-m1-cC_2fa8-a1-m1-cB
9 2ojl-a1-m2-cA 78 79 0.6353 0.6923 0.6835 2.80e-35 2ojl-a1-m2-cB_2ojl-a1-m2-cA
10 2ojl-a1-m1-cA 78 79 0.6353 0.6923 0.6835 2.80e-35 2ojl-a1-m2-cB_2ojl-a1-m1-cA
11 2ojl-a1-m2-cB 76 77 0.6353 0.7105 0.7013 3.34e-35 2ojl-a1-m2-cB_2ojl-a1-m1-cA, 2ojl-a1-m2-cB_2ojl-a1-m2-cA
12 2p0g-a1-m1-cD 79 80 0.6353 0.6835 0.6750 3.71e-35 2p0g-a1-m1-cA_2p0g-a1-m1-cD, 2p0g-a1-m1-cC_2p0g-a1-m1-cD
13 2p0g-a1-m1-cC 79 79 0.6235 0.6709 0.6709 2.89e-34 2p0g-a1-m1-cC_2p0g-a1-m1-cD
14 2p0g-a1-m1-cA 77 78 0.6118 0.6753 0.6667 2.40e-33 2p0g-a1-m1-cA_2p0g-a1-m1-cD
15 2fa8-a1-m1-cC 80 79 0.6235 0.6625 0.6709 2.72e-33 2fa8-a1-m1-cC_2fa8-a1-m1-cB, 2fa8-a1-m1-cC_2fa8-a1-m1-cD
16 2fa8-a1-m1-cD 80 78 0.6118 0.6500 0.6667 1.76e-32 2fa8-a1-m1-cC_2fa8-a1-m1-cD
17 3dex-a4-m1-cH 83 79 0.4824 0.4940 0.5190 8.91e-25 3dex-a4-m1-cG_3dex-a4-m1-cH
18 3dex-a4-m1-cG 77 75 0.4588 0.5065 0.5200 7.79e-23 3dex-a4-m1-cG_3dex-a4-m1-cH
19 1uf2-a1-m9-cJ 413 35 0.1294 0.0266 0.3143 1.6 1uf2-a1-m9-cJ_1uf2-a1-m9-cE
20 1uf2-a1-m9-cP 414 35 0.1294 0.0266 0.3143 1.6 1uf2-a1-m8-cP_1uf2-a1-m9-cP, 1uf2-a1-m9-cP_1uf2-a1-m10-cC
21 1uf2-a1-m8-cP 414 35 0.1294 0.0266 0.3143 1.6 1uf2-a1-m8-cP_1uf2-a1-m9-cP
22 1uf2-a1-m10-cC 415 35 0.1294 0.0265 0.3143 1.6 1uf2-a1-m9-cP_1uf2-a1-m10-cC
23 1uf2-a1-m9-cG 417 35 0.1294 0.0264 0.3143 1.6 1uf2-a1-m9-cG_1uf2-a1-m9-cT
24 1uf2-a1-m9-cT 421 35 0.1294 0.0261 0.3143 1.6 1uf2-a1-m54-cT_1uf2-a1-m9-cT, 1uf2-a1-m9-cG_1uf2-a1-m9-cT
25 1uf2-a1-m9-cE 421 35 0.1294 0.0261 0.3143 1.6 1uf2-a1-m9-cJ_1uf2-a1-m9-cE
26 1uf2-a1-m54-cT 421 35 0.1294 0.0261 0.3143 1.6 1uf2-a1-m54-cT_1uf2-a1-m9-cT

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Reference:
Jacob Schwartz et al.

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