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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
RKQDTQRALHLLEEYRSKLSQTEDRQLRSSIERVISIFQSNLFQALIDIQEFYEVTLLDN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rso-a1-m1-cC 60 60 1.0000 1.0000 1.0000 3.73e-37 1rso-a1-m1-cA_1rso-a1-m1-cC
2 1rso-a1-m1-cA 60 60 1.0000 1.0000 1.0000 3.73e-37 1rso-a1-m1-cA_1rso-a1-m1-cC
3 4rp3-a1-m1-cA 91 59 0.6500 0.4286 0.6610 2.83e-22 4rp3-a1-m1-cB_4rp3-a1-m1-cA
4 4rp3-a1-m1-cB 90 58 0.6333 0.4222 0.6552 1.50e-21 4rp3-a1-m1-cB_4rp3-a1-m1-cA
5 6gfl-a1-m1-cA 431 28 0.2167 0.0302 0.4643 5.5 6gfl-a1-m1-cB_6gfl-a1-m1-cA
6 3ofh-a3-m1-cA 86 21 0.1500 0.1047 0.4286 6.1 3ofh-a3-m1-cB_3ofh-a3-m1-cA
7 4yd9-a1-m1-cb 1656 34 0.2000 0.0072 0.3529 6.5 4yd9-a1-m1-cA_4yd9-a1-m1-cb
8 4yd9-a1-m1-cA 1656 34 0.2000 0.0072 0.3529 6.5 4yd9-a1-m1-cA_4yd9-a1-m1-cb
9 3ofh-a3-m1-cB 79 21 0.1500 0.1139 0.4286 8.0 3ofh-a3-m1-cB_3ofh-a3-m1-cA
10 3pih-a1-m2-cA 836 35 0.2000 0.0144 0.3429 9.1 3pih-a1-m1-cA_3pih-a1-m2-cA
11 3pih-a1-m1-cA 836 35 0.2000 0.0144 0.3429 9.1 3pih-a1-m1-cA_3pih-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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