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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
RLGSGDVHKHTGRNCGRKFKIGEPLYRCHECGCDDTCVLCIHCFNPKDHVNHHVCTDICT
EFTSGICDCGDEEAWNSPLHCKAEEQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kgi-a1-m2-cB 86 86 1.0000 1.0000 1.0000 1.01e-59 6kgi-a1-m1-cB_6kgi-a1-m2-cB
2 6kgi-a1-m1-cB 86 86 1.0000 1.0000 1.0000 1.01e-59 6kgi-a1-m1-cB_6kgi-a1-m2-cB
3 7xwf-a1-m2-cA 73 72 0.3256 0.3836 0.3889 1.05e-07 7xwf-a1-m1-cA_7xwf-a1-m2-cA
4 7xwf-a1-m1-cA 73 72 0.3256 0.3836 0.3889 1.05e-07 7xwf-a1-m1-cA_7xwf-a1-m2-cA
5 7xwg-a1-m1-cB 72 69 0.3140 0.3750 0.3913 1.54e-07 7xwg-a1-m1-cA_7xwg-a1-m1-cB
6 7xwg-a1-m1-cA 72 69 0.3140 0.3750 0.3913 1.54e-07 7xwg-a1-m1-cA_7xwg-a1-m1-cB
7 7xwd-a1-m2-cA 70 69 0.3140 0.3857 0.3913 1.57e-07 7xwd-a1-m1-cA_7xwd-a1-m2-cA
8 7xwd-a1-m1-cA 70 69 0.3140 0.3857 0.3913 1.57e-07 7xwd-a1-m1-cA_7xwd-a1-m2-cA
9 7xwe-a1-m1-cB 76 59 0.2907 0.3289 0.4237 3.04e-06 7xwe-a1-m1-cA_7xwe-a1-m1-cB
10 7xwe-a1-m1-cA 76 59 0.2907 0.3289 0.4237 3.04e-06 7xwe-a1-m1-cA_7xwe-a1-m1-cB
11 3ty9-a3-m1-cB 374 14 0.1047 0.0241 0.6429 6.4 3ty9-a3-m1-cB_3ty9-a3-m3-cD
12 3ty9-a4-m1-cC 376 14 0.1047 0.0239 0.6429 6.4 3ty9-a4-m1-cD_3ty9-a4-m1-cC
13 3ty9-a4-m1-cD 374 14 0.1047 0.0241 0.6429 6.5 3ty9-a4-m1-cD_3ty9-a4-m1-cC
14 3ty9-a3-m3-cD 374 14 0.1047 0.0241 0.6429 6.5 3ty9-a3-m1-cB_3ty9-a3-m3-cD
15 3ty5-a1-m1-cB 381 14 0.1047 0.0236 0.6429 7.0 3ty5-a1-m1-cA_3ty5-a1-m1-cB
16 3ty5-a1-m1-cA 381 14 0.1047 0.0236 0.6429 7.0 3ty5-a1-m1-cA_3ty5-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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