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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
RLTPHEQERLLLSYAAELARRRRARGLRLNHPEAIAVIADHILEGARDGRTVAELMASGR
EVLGRDDVMEGVPEMLAEVQVEATFPDGTKLVTVHQPIA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fvh-a1-m1-cC 99 99 1.0000 1.0000 1.0000 1.40e-66 2fvh-a1-m1-cB_2fvh-a1-m1-cC
2 2fvh-a1-m1-cB 99 99 1.0000 1.0000 1.0000 1.40e-66 2fvh-a1-m1-cB_2fvh-a1-m1-cC
3 5ol4-a1-m3-cA 99 98 0.6465 0.6465 0.6531 1.89e-44 5ol4-a1-m2-cA_5ol4-a1-m3-cA
4 5ol4-a1-m2-cA 99 98 0.6465 0.6465 0.6531 1.89e-44 5ol4-a1-m2-cA_5ol4-a1-m3-cA
5 4fur-a2-m1-cF 100 98 0.4949 0.4900 0.5000 3.44e-34 4fur-a2-m1-cD_4fur-a2-m1-cF
6 4fur-a2-m1-cD 100 98 0.4949 0.4900 0.5000 3.44e-34 4fur-a2-m1-cD_4fur-a2-m1-cF
7 3qgk-a1-m2-cP 224 99 0.5657 0.2500 0.5657 1.69e-32 3qgk-a1-m2-cM_3qgk-a1-m2-cP
8 3qgk-a1-m2-cM 224 99 0.5657 0.2500 0.5657 1.69e-32 3qgk-a1-m2-cM_3qgk-a1-m2-cP
9 4g7e-a1-m3-cA 831 100 0.5960 0.0710 0.5900 1.40e-31 4g7e-a1-m3-cB_4g7e-a1-m3-cA
10 4g7e-a1-m3-cB 830 100 0.5960 0.0711 0.5900 1.50e-31 4g7e-a1-m2-cB_4g7e-a1-m3-cB, 4g7e-a1-m3-cB_4g7e-a1-m3-cA
11 4g7e-a1-m2-cB 830 100 0.5960 0.0711 0.5900 1.50e-31 4g7e-a1-m2-cB_4g7e-a1-m3-cB
12 3la4-a1-m6-cA 833 100 0.5960 0.0708 0.5900 1.97e-29 3la4-a1-m1-cA_3la4-a1-m6-cA
13 3la4-a1-m1-cA 833 100 0.5960 0.0708 0.5900 1.97e-29 3la4-a1-m1-cA_3la4-a1-m6-cA
14 4gy7-a1-m3-cA 827 100 0.5960 0.0713 0.5900 2.08e-29 4gy7-a1-m2-cA_4gy7-a1-m3-cA
15 4gy7-a1-m2-cA 827 100 0.5960 0.0713 0.5900 2.08e-29 4gy7-a1-m2-cA_4gy7-a1-m3-cA
16 6xxw-a1-m4-cA 578 90 0.2626 0.0450 0.2889 3.0 6xxw-a1-m1-cA_6xxw-a1-m4-cA, 6xxw-a1-m2-cA_6xxw-a1-m4-cA, 6xxw-a1-m3-cA_6xxw-a1-m4-cA
17 6xxw-a1-m3-cA 578 90 0.2626 0.0450 0.2889 3.0 6xxw-a1-m3-cA_6xxw-a1-m4-cA
18 6xxw-a1-m2-cA 578 90 0.2626 0.0450 0.2889 3.0 6xxw-a1-m2-cA_6xxw-a1-m4-cA
19 6xxw-a1-m1-cA 578 90 0.2626 0.0450 0.2889 3.0 6xxw-a1-m1-cA_6xxw-a1-m4-cA
20 1vbh-a1-m2-cA 862 61 0.1717 0.0197 0.2787 9.6 1vbh-a1-m1-cA_1vbh-a1-m2-cA
21 1vbh-a1-m1-cA 862 61 0.1717 0.0197 0.2787 9.6 1vbh-a1-m1-cA_1vbh-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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