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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
RMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6od3-a4-m1-cI 59 59 1.0000 1.0000 1.0000 5.78e-37 6od3-a4-m1-cJ_6od3-a4-m1-cI
2 6od5-a1-m1-cA 62 59 1.0000 0.9516 1.0000 8.22e-37 6od5-a1-m1-cB_6od5-a1-m1-cA
3 6od5-a1-m1-cB 60 58 0.9831 0.9667 1.0000 3.12e-36 6od5-a1-m1-cB_6od5-a1-m1-cA
4 6od3-a4-m1-cJ 52 52 0.8814 1.0000 1.0000 2.50e-31 6od3-a4-m1-cJ_6od3-a4-m1-cI
5 3u5v-a1-m2-cA 62 55 0.7627 0.7258 0.8182 1.14e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
6 3u5v-a1-m1-cA 62 55 0.7627 0.7258 0.8182 1.14e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
7 4rk6-a1-m1-cA 261 28 0.2034 0.0460 0.4286 0.032 4rk6-a1-m1-cB_4rk6-a1-m1-cA
8 7z5k-a1-m1-cA 56 54 0.3220 0.3393 0.3519 0.041 7z5k-a1-m1-cA_7z5k-a1-m1-cB
9 7z5k-a1-m1-cB 56 54 0.3220 0.3393 0.3519 0.045 7z5k-a1-m1-cA_7z5k-a1-m1-cB
10 1mdy-a2-m1-cD 62 58 0.3390 0.3226 0.3448 0.33 1mdy-a2-m1-cC_1mdy-a2-m1-cD
11 1mdy-a2-m1-cC 62 58 0.3390 0.3226 0.3448 0.33 1mdy-a2-m1-cC_1mdy-a2-m1-cD
12 1q3i-a2-m3-cA 192 40 0.2034 0.0625 0.3000 0.38 1q3i-a2-m2-cA_1q3i-a2-m3-cA
13 1q3i-a2-m2-cA 192 40 0.2034 0.0625 0.3000 0.38 1q3i-a2-m2-cA_1q3i-a2-m3-cA
14 6fx5-a1-m1-cB 74 45 0.2373 0.1892 0.3111 3.1 6fx5-a1-m1-cA_6fx5-a1-m1-cB
15 6fx5-a1-m1-cA 72 44 0.2373 0.1944 0.3182 5.4 6fx5-a1-m1-cA_6fx5-a1-m1-cB
16 7qpg-a1-m1-cS 2208 40 0.2542 0.0068 0.3750 8.1 7qpg-a1-m1-cR_7qpg-a1-m1-cS
17 7qpg-a1-m1-cR 2208 40 0.2542 0.0068 0.3750 8.1 7qpg-a1-m1-cR_7qpg-a1-m1-cS

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Reference:
Jacob Schwartz et al.

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