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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
RMQLEKVELLKNHLEEVRLKLV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2oxj-a1-m1-cB 22 22 1.0000 1.0000 1.0000 8.30e-08 2oxj-a1-m1-cB_2oxj-a1-m1-cA
2 2oxj-a1-m1-cA 24 22 1.0000 0.9167 1.0000 9.14e-08 2oxj-a1-m1-cB_2oxj-a1-m1-cA
3 2oxk-a1-m4-cA 24 22 0.6364 0.5833 0.6364 0.002 2oxk-a1-m2-cA_2oxk-a1-m4-cA
4 2oxk-a1-m2-cA 24 22 0.6364 0.5833 0.6364 0.002 2oxk-a1-m2-cA_2oxk-a1-m4-cA
5 5ng7-a1-m1-cA 292 19 0.4545 0.0342 0.5263 4.0 5ng7-a1-m1-cB_5ng7-a1-m1-cA
6 3c3f-a1-m1-cD 23 23 0.5455 0.5217 0.5217 5.1 3c3f-a1-m1-cC_3c3f-a1-m1-cD
7 3c3f-a1-m1-cC 23 23 0.5455 0.5217 0.5217 5.1 3c3f-a1-m1-cC_3c3f-a1-m1-cD
8 5ng7-a1-m1-cB 290 19 0.4545 0.0345 0.5263 7.8 5ng7-a1-m1-cB_5ng7-a1-m1-cA
9 3lwt-a2-m2-cX 457 19 0.4091 0.0197 0.4737 8.6 3lwt-a2-m1-cX_3lwt-a2-m2-cX
10 3lwt-a2-m1-cX 457 19 0.4091 0.0197 0.4737 8.6 3lwt-a2-m1-cX_3lwt-a2-m2-cX
11 6k8s-a1-m1-cB 662 18 0.4545 0.0151 0.5556 9.8 6k8s-a1-m1-cA_6k8s-a1-m1-cB
12 6k8s-a1-m1-cA 662 18 0.4545 0.0151 0.5556 9.8 6k8s-a1-m1-cA_6k8s-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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