Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=24)
RMQLEKVELLKNHLEEVRLKLVER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2oxj-a1-m1-cA 24 24 1.0000 1.0000 1.0000 5.14e-09 2oxj-a1-m1-cB_2oxj-a1-m1-cA
2 2oxj-a1-m1-cB 22 22 0.9167 1.0000 1.0000 9.97e-08 2oxj-a1-m1-cB_2oxj-a1-m1-cA
3 2oxk-a1-m4-cA 24 24 0.6667 0.6667 0.6667 9.76e-05 2oxk-a1-m2-cA_2oxk-a1-m4-cA
4 2oxk-a1-m2-cA 24 24 0.6667 0.6667 0.6667 9.76e-05 2oxk-a1-m2-cA_2oxk-a1-m4-cA
5 5ng7-a1-m1-cA 292 19 0.4167 0.0342 0.5263 4.3 5ng7-a1-m1-cB_5ng7-a1-m1-cA
6 3c3f-a1-m1-cD 23 23 0.5000 0.5217 0.5217 6.5 3c3f-a1-m1-cC_3c3f-a1-m1-cD
7 3c3f-a1-m1-cC 23 23 0.5000 0.5217 0.5217 6.5 3c3f-a1-m1-cC_3c3f-a1-m1-cD
8 3hez-a1-m1-cC 25 25 0.5000 0.4800 0.4800 6.5 3hez-a1-m1-cB_3hez-a1-m1-cC
9 3hez-a1-m1-cB 25 25 0.5000 0.4800 0.4800 6.5 3hez-a1-m1-cA_3hez-a1-m1-cB, 3hez-a1-m1-cB_3hez-a1-m1-cC
10 3hez-a1-m1-cA 25 25 0.5000 0.4800 0.4800 6.5 3hez-a1-m1-cA_3hez-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600