Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
RNPITITPQFDCGATNSQQYVARSGDTLTKIAQEIYHDVVGVCDIARANNLADPNRIDAG
TPYTIPINCQTYDRNSCL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q40-a2-m1-cC 79 78 1.0000 0.9873 1.0000 9.19e-54 6q40-a2-m1-cD_6q40-a2-m1-cC
2 6q40-a2-m1-cD 78 78 1.0000 1.0000 1.0000 1.10e-53 6q40-a2-m1-cD_6q40-a2-m1-cC
3 4b8v-a1-m2-cA 189 67 0.3590 0.1481 0.4179 1.28e-11 4b8v-a1-m1-cA_4b8v-a1-m2-cA
4 4b8v-a1-m2-cA 189 49 0.2179 0.0899 0.3469 0.26 4b8v-a1-m1-cA_4b8v-a1-m2-cA
5 4b8v-a1-m2-cA 189 67 0.2308 0.0952 0.2687 1.3 4b8v-a1-m1-cA_4b8v-a1-m2-cA
6 4b8v-a1-m1-cA 189 67 0.3590 0.1481 0.4179 1.28e-11 4b8v-a1-m1-cA_4b8v-a1-m2-cA
7 4b8v-a1-m1-cA 189 49 0.2179 0.0899 0.3469 0.26 4b8v-a1-m1-cA_4b8v-a1-m2-cA
8 4b8v-a1-m1-cA 189 67 0.2308 0.0952 0.2687 1.3 4b8v-a1-m1-cA_4b8v-a1-m2-cA
9 7b5h-a1-m1-cFK 232 50 0.1795 0.0603 0.2800 1.2 7b5h-a1-m1-cEK_7b5h-a1-m1-cFK
10 7b5h-a1-m1-cEK 232 50 0.1795 0.0603 0.2800 1.2 7b5h-a1-m1-cEK_7b5h-a1-m1-cFK
11 5xaq-a1-m1-cB 161 50 0.2179 0.1056 0.3400 3.7 5xaq-a1-m1-cB_5xaq-a1-m1-cA
12 5xaq-a1-m1-cA 166 50 0.2179 0.1024 0.3400 3.9 5xaq-a1-m1-cB_5xaq-a1-m1-cA
13 8cio-a1-m1-cE 159 54 0.2179 0.1069 0.3148 5.5 8cio-a1-m1-cA_8cio-a1-m1-cE, 8cio-a1-m1-cD_8cio-a1-m1-cE
14 8cio-a1-m1-cD 159 54 0.2179 0.1069 0.3148 5.5 8cio-a1-m1-cD_8cio-a1-m1-cE
15 8cio-a1-m1-cA 159 54 0.2179 0.1069 0.3148 5.5 8cio-a1-m1-cA_8cio-a1-m1-cE
16 5w7p-a1-m2-cA 396 35 0.1538 0.0303 0.3429 6.9 5w7p-a1-m1-cA_5w7p-a1-m2-cA
17 5w7p-a1-m1-cA 396 35 0.1538 0.0303 0.3429 6.9 5w7p-a1-m1-cA_5w7p-a1-m2-cA
18 2q9o-a1-m1-cB 558 45 0.2051 0.0287 0.3556 9.4 2q9o-a1-m1-cA_2q9o-a1-m1-cB
19 2q9o-a1-m1-cA 558 45 0.2051 0.0287 0.3556 9.4 2q9o-a1-m1-cA_2q9o-a1-m1-cB
20 3dkh-a2-m2-cB 558 45 0.2051 0.0287 0.3556 9.6 3dkh-a2-m1-cA_3dkh-a2-m2-cB
21 3dkh-a2-m1-cA 558 45 0.2051 0.0287 0.3556 9.6 3dkh-a2-m1-cA_3dkh-a2-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600