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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
RNSAKDIRTEERARVQLGNVVTAAALHGGIRISDQTTNSVKTVVGKGESRVLIGNEYGGK
GFWDNHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mus-a1-m1-cE 71 71 1.0000 1.0000 1.0000 4.39e-47 2mus-a1-m1-cD_2mus-a1-m1-cE
2 2mus-a1-m1-cD 71 71 1.0000 1.0000 1.0000 4.39e-47 2mus-a1-m1-cD_2mus-a1-m1-cE
3 2mus-a1-m1-cC 71 71 1.0000 1.0000 1.0000 4.39e-47 2mus-a1-m1-cB_2mus-a1-m1-cC
4 2mus-a1-m1-cB 71 71 1.0000 1.0000 1.0000 4.39e-47 2mus-a1-m1-cB_2mus-a1-m1-cC
5 2kj3-a1-m1-cC 79 71 0.9859 0.8861 0.9859 1.60e-46 2kj3-a1-m1-cB_2kj3-a1-m1-cC
6 2kj3-a1-m1-cB 79 71 0.9859 0.8861 0.9859 1.60e-46 2kj3-a1-m1-cB_2kj3-a1-m1-cC
7 3jur-a1-m1-cD 446 28 0.1408 0.0224 0.3571 7.6 3jur-a1-m1-cB_3jur-a1-m1-cD, 3jur-a1-m1-cC_3jur-a1-m1-cD
8 3jur-a1-m1-cC 444 28 0.1408 0.0225 0.3571 7.6 3jur-a1-m1-cC_3jur-a1-m1-cD
9 3jur-a1-m1-cB 444 28 0.1408 0.0225 0.3571 7.6 3jur-a1-m1-cB_3jur-a1-m1-cD
10 5tsz-a2-m2-cC 130 35 0.1549 0.0846 0.3143 8.9 5tsz-a2-m1-cC_5tsz-a2-m2-cC
11 5tsz-a2-m1-cC 130 35 0.1549 0.0846 0.3143 8.9 5tsz-a2-m1-cC_5tsz-a2-m2-cC
12 6w0p-a2-m1-cD 677 28 0.1549 0.0162 0.3929 9.5 6w0p-a2-m1-cD_6w0p-a2-m1-cC
13 6w0p-a2-m1-cC 719 28 0.1549 0.0153 0.3929 9.5 6w0p-a2-m1-cD_6w0p-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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