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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
RPFVEMYSEIPEIIHMTEGRELVIPCRVTSPNITVTLKKFPLDTLIPDGKRIIWDSRKGF
IISNATYKEIGLLTCEATVNGHLYKTNYLTHRQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4cl7-a2-m1-cD 93 93 1.0000 1.0000 1.0000 3.34e-66 4cl7-a2-m1-cB_4cl7-a2-m1-cD
2 4cl7-a2-m1-cB 93 93 1.0000 1.0000 1.0000 3.34e-66 4cl7-a2-m1-cB_4cl7-a2-m1-cD
3 5t89-a1-m1-cX 596 93 1.0000 0.1560 1.0000 4.45e-62 5t89-a1-m1-cX_5t89-a1-m1-cY
4 5t89-a1-m1-cY 597 93 1.0000 0.1558 1.0000 4.67e-62 5t89-a1-m1-cX_5t89-a1-m1-cY
5 1bih-a1-m1-cB 391 76 0.2473 0.0588 0.3026 0.015 1bih-a1-m1-cA_1bih-a1-m1-cB
6 1bih-a1-m1-cA 391 76 0.2473 0.0588 0.3026 0.015 1bih-a1-m1-cA_1bih-a1-m1-cB
7 8edi-a1-m1-cB 200 77 0.2151 0.1000 0.2597 0.076 8edi-a1-m1-cA_8edi-a1-m1-cB
8 8edi-a1-m1-cA 200 77 0.2151 0.1000 0.2597 0.076 8edi-a1-m1-cA_8edi-a1-m1-cB
9 6wsh-a1-m1-cB 190 54 0.1290 0.0632 0.2222 2.2 6wsh-a1-m1-cA_6wsh-a1-m1-cB
10 6wsh-a1-m1-cA 190 54 0.1290 0.0632 0.2222 2.2 6wsh-a1-m1-cA_6wsh-a1-m1-cB
11 2ovs-a2-m2-cB 115 29 0.1183 0.0957 0.3793 6.3 2ovs-a2-m1-cA_2ovs-a2-m2-cB
12 2ovs-a2-m1-cA 115 29 0.1183 0.0957 0.3793 6.3 2ovs-a2-m1-cA_2ovs-a2-m2-cB
13 2ovs-a1-m1-cB 115 29 0.1183 0.0957 0.3793 6.3 2ovs-a1-m1-cA_2ovs-a1-m1-cB
14 2ovs-a1-m1-cA 115 29 0.1183 0.0957 0.3793 6.3 2ovs-a1-m1-cA_2ovs-a1-m1-cB
15 7som-a1-m1-cE 1516 22 0.1075 0.0066 0.4545 7.5 7som-a1-m1-cD_7som-a1-m1-cE
16 7som-a1-m1-cD 1516 22 0.1075 0.0066 0.4545 7.5 7som-a1-m1-cD_7som-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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