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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
RPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEG
HGIFVRQSQIQVFE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1txq-a1-m2-cA 74 74 1.0000 1.0000 1.0000 1.70e-49 1txq-a1-m1-cA_1txq-a1-m2-cA
2 1txq-a1-m1-cA 74 74 1.0000 1.0000 1.0000 1.70e-49 1txq-a1-m1-cA_1txq-a1-m2-cA
3 2hkn-a1-m1-cA 76 72 0.9730 0.9474 1.0000 3.06e-48 2hkn-a1-m1-cB_2hkn-a1-m1-cA
4 3e2u-a5-m1-cC 72 72 0.9730 1.0000 1.0000 4.88e-48 3e2u-a5-m1-cB_3e2u-a5-m1-cC
5 3e2u-a5-m1-cB 72 72 0.9730 1.0000 1.0000 4.88e-48 3e2u-a5-m1-cB_3e2u-a5-m1-cC
6 2hkn-a1-m1-cB 72 72 0.9730 1.0000 1.0000 4.88e-48 2hkn-a1-m1-cB_2hkn-a1-m1-cA
7 2z0w-a1-m2-cA 72 69 0.4324 0.4444 0.4638 2.27e-16 2z0w-a1-m1-cA_2z0w-a1-m2-cA
8 2z0w-a1-m1-cA 72 69 0.4324 0.4444 0.4638 2.27e-16 2z0w-a1-m1-cA_2z0w-a1-m2-cA
9 6kma-a2-m1-cD 836 55 0.2703 0.0239 0.3636 0.25 6kma-a2-m1-cD_6kma-a2-m1-cC
10 8b5t-a2-m1-cB 230 33 0.1622 0.0522 0.3636 1.8 8b5t-a2-m1-cC_8b5t-a2-m1-cB
11 3ftn-a1-m1-cD 352 34 0.1892 0.0398 0.4118 2.9 3ftn-a1-m1-cA_3ftn-a1-m1-cD, 3ftn-a1-m1-cB_3ftn-a1-m1-cD, 3ftn-a1-m1-cC_3ftn-a1-m1-cD
12 3ftn-a1-m1-cC 352 34 0.1892 0.0398 0.4118 2.9 3ftn-a1-m1-cC_3ftn-a1-m1-cD
13 3ftn-a1-m1-cB 352 34 0.1892 0.0398 0.4118 2.9 3ftn-a1-m1-cB_3ftn-a1-m1-cD
14 3ftn-a1-m1-cA 352 34 0.1892 0.0398 0.4118 2.9 3ftn-a1-m1-cA_3ftn-a1-m1-cD
15 6kma-a2-m1-cC 839 57 0.2838 0.0250 0.3684 4.7 6kma-a2-m1-cD_6kma-a2-m1-cC
16 7k1r-a1-m3-cC 531 35 0.1892 0.0264 0.4000 4.9 7k1r-a1-m3-cC_7k1r-a1-m1-cD, 7k1r-a1-m3-cC_7k1r-a1-m2-cB
17 7k1r-a1-m2-cB 532 35 0.1892 0.0263 0.4000 4.9 7k1r-a1-m3-cC_7k1r-a1-m2-cB
18 7k1r-a1-m1-cD 534 35 0.1892 0.0262 0.4000 5.2 7k1r-a1-m3-cC_7k1r-a1-m1-cD
19 3n54-a3-m6-cB 311 89 0.3649 0.0868 0.3034 9.2 3n54-a3-m1-cB_3n54-a3-m6-cB, 3n54-a3-m3-cB_3n54-a3-m6-cB, 3n54-a3-m5-cB_3n54-a3-m6-cB
20 3n54-a3-m5-cB 311 89 0.3649 0.0868 0.3034 9.2 3n54-a3-m5-cB_3n54-a3-m6-cB
21 3n54-a3-m3-cB 311 89 0.3649 0.0868 0.3034 9.2 3n54-a3-m3-cB_3n54-a3-m6-cB
22 3n54-a3-m1-cB 311 89 0.3649 0.0868 0.3034 9.2 3n54-a3-m1-cB_3n54-a3-m6-cB

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Reference:
Jacob Schwartz et al.

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