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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
RQCKAESNTFTGICIAKPPCRQACIREKFTDGHCSKVLRRCLCTKRC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6mry-a3-m1-cJ 48 47 1.0000 0.9792 1.0000 8.61e-29 6mry-a3-m1-cC_6mry-a3-m1-cJ
2 6mry-a3-m1-cC 47 47 1.0000 1.0000 1.0000 1.14e-28 6mry-a3-m1-cC_6mry-a3-m1-cJ
3 7c31-a1-m1-cB 47 47 0.4043 0.4043 0.4043 7.68e-07 7c31-a1-m1-cA_7c31-a1-m1-cB
4 7c31-a1-m1-cA 47 47 0.4043 0.4043 0.4043 7.68e-07 7c31-a1-m1-cA_7c31-a1-m1-cB
5 6lcq-a1-m1-cB 54 49 0.3830 0.3333 0.3673 5.34e-05 6lcq-a1-m1-cA_6lcq-a1-m1-cB
6 6lcq-a1-m1-cA 54 49 0.3830 0.3333 0.3673 5.34e-05 6lcq-a1-m1-cA_6lcq-a1-m1-cB
7 3psm-a1-m1-cB 47 48 0.3191 0.3191 0.3125 2.5 3psm-a1-m1-cA_3psm-a1-m1-cB
8 3psm-a1-m1-cA 47 48 0.3191 0.3191 0.3125 2.5 3psm-a1-m1-cA_3psm-a1-m1-cB
9 3vzx-a1-m1-cA 227 20 0.1915 0.0396 0.4500 4.8 3vzx-a1-m1-cA_3vzx-a1-m1-cB
10 3vzx-a1-m1-cB 228 20 0.1915 0.0395 0.4500 4.8 3vzx-a1-m1-cA_3vzx-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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