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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=34)
RRKDTHIRELEDYIDNLLVRVEETPSILRVPYEP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gzd-a1-m1-cD 34 34 1.0000 1.0000 1.0000 3.59e-18 2gzd-a1-m1-cC_2gzd-a1-m1-cD
2 2gzd-a1-m1-cC 34 34 1.0000 1.0000 1.0000 3.59e-18 2gzd-a1-m1-cC_2gzd-a1-m1-cD
3 2k6s-a1-m1-cB 41 21 0.6176 0.5122 1.0000 1.08e-08 2k6s-a1-m1-cA_2k6s-a1-m1-cB
4 2k6s-a1-m1-cA 41 21 0.6176 0.5122 1.0000 1.08e-08 2k6s-a1-m1-cA_2k6s-a1-m1-cB
5 2hv8-a2-m1-cE 55 22 0.3824 0.2364 0.5909 0.34 2hv8-a2-m1-cF_2hv8-a2-m1-cE
6 4uj4-a3-m3-cL 38 22 0.3824 0.3421 0.5909 0.36 4uj4-a3-m1-cC_4uj4-a3-m3-cL
7 4uj4-a3-m1-cC 36 22 0.3824 0.3611 0.5909 0.37 4uj4-a3-m1-cC_4uj4-a3-m3-cL
8 2hv8-a2-m1-cF 41 22 0.3824 0.3171 0.5909 0.42 2hv8-a2-m1-cF_2hv8-a2-m1-cE
9 4eei-a2-m2-cA 414 22 0.2941 0.0242 0.4545 4.6 4eei-a2-m1-cA_4eei-a2-m2-cA
10 4eei-a2-m1-cA 414 22 0.2941 0.0242 0.4545 4.6 4eei-a2-m1-cA_4eei-a2-m2-cA
11 4eei-a1-m2-cA 414 22 0.2941 0.0242 0.4545 4.6 4eei-a1-m2-cA_4eei-a1-m2-cB
12 4eei-a1-m1-cA 414 22 0.2941 0.0242 0.4545 4.6 4eei-a1-m1-cA_4eei-a1-m2-cB
13 4eei-a1-m2-cB 423 22 0.2941 0.0236 0.4545 4.7 4eei-a1-m1-cA_4eei-a1-m2-cB, 4eei-a1-m2-cA_4eei-a1-m2-cB
14 6vhv-a2-m4-cA 488 27 0.2941 0.0205 0.3704 4.8 6vhv-a2-m1-cA_6vhv-a2-m4-cA, 6vhv-a2-m2-cA_6vhv-a2-m4-cA, 6vhv-a2-m3-cA_6vhv-a2-m4-cA
15 6vhv-a2-m3-cA 488 27 0.2941 0.0205 0.3704 4.8 6vhv-a2-m3-cA_6vhv-a2-m4-cA
16 6vhv-a2-m2-cA 488 27 0.2941 0.0205 0.3704 4.8 6vhv-a2-m2-cA_6vhv-a2-m4-cA
17 6vhv-a2-m1-cA 488 27 0.2941 0.0205 0.3704 4.8 6vhv-a2-m1-cA_6vhv-a2-m4-cA
18 8glv-a1-m1-cFa 4484 32 0.4118 0.0031 0.4375 8.2 8glv-a1-m1-cAX_8glv-a1-m1-cFa
19 8glv-a1-m1-cAX 4484 32 0.4118 0.0031 0.4375 8.2 8glv-a1-m1-cAX_8glv-a1-m1-cFa
20 4zlf-a1-m2-cA 785 16 0.2353 0.0102 0.5000 8.8 4zlf-a1-m1-cA_4zlf-a1-m2-cA
21 4zlf-a1-m1-cA 785 16 0.2353 0.0102 0.5000 8.8 4zlf-a1-m1-cA_4zlf-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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