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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
RRLDSVITHSDGIIATDRRGRIRIVNDALKLGAKEDIIGYYLSVLSLEDEFKLEEIQENN
DSFLLDLGLIARVNFSTIVQETGFVTGYIAVLHDVTEQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4mn5-a3-m1-cA 98 98 1.0000 1.0000 1.0000 5.20e-66 4mn5-a3-m1-cB_4mn5-a3-m1-cA
2 4mn5-a3-m1-cB 96 96 0.9796 1.0000 1.0000 2.35e-64 4mn5-a3-m1-cB_4mn5-a3-m1-cA
3 4i5s-a1-m1-cA 380 106 0.3265 0.0842 0.3019 2.80e-07 4i5s-a1-m1-cA_4i5s-a1-m1-cB
4 4i5s-a1-m1-cB 395 106 0.3265 0.0810 0.3019 3.23e-07 4i5s-a1-m1-cA_4i5s-a1-m1-cB
5 3ism-a1-m1-cB 247 20 0.1020 0.0405 0.5000 4.5 3ism-a1-m1-cA_3ism-a1-m1-cB
6 3ism-a1-m1-cA 245 20 0.1020 0.0408 0.5000 4.7 3ism-a1-m1-cA_3ism-a1-m1-cB
7 4xd1-a1-m2-cA 397 68 0.1939 0.0479 0.2794 4.9 4xd1-a1-m1-cA_4xd1-a1-m2-cA
8 4xd1-a1-m1-cA 397 68 0.1939 0.0479 0.2794 4.9 4xd1-a1-m1-cA_4xd1-a1-m2-cA
9 1saz-a1-m8-cA 363 25 0.1327 0.0358 0.5200 7.7 1saz-a1-m2-cA_1saz-a1-m8-cA
10 1saz-a1-m2-cA 363 25 0.1327 0.0358 0.5200 7.7 1saz-a1-m2-cA_1saz-a1-m8-cA

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Reference:
Jacob Schwartz et al.

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