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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
RSGFLTLGYRGSYRVARIMVCGRIALAKEVFGDTLNESRDYTSRFYLKFTYLEQAFDRLS
EAGFHMVACNSSGTAAFVDKIWSSYTEYIFFRP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6g57-a1-m1-cB 93 93 1.0000 1.0000 1.0000 1.49e-65 6g57-a1-m1-cD_6g57-a1-m1-cB
2 6g57-a1-m1-cC 88 93 0.9247 0.9773 0.9247 5.30e-56 6g57-a1-m1-cD_6g57-a1-m1-cC
3 6g57-a1-m1-cD 82 93 0.8817 1.0000 0.8817 2.49e-50 6g57-a1-m1-cD_6g57-a1-m1-cB, 6g57-a1-m1-cD_6g57-a1-m1-cC
4 6m8s-a1-m1-cO 105 106 0.7634 0.6762 0.6698 1.87e-44 6m8s-a1-m1-cB_6m8s-a1-m1-cO
5 6qb7-a1-m1-cB 114 106 0.7849 0.6404 0.6887 2.44e-44 6qb7-a1-m1-cA_6qb7-a1-m1-cB
6 6qb7-a1-m1-cA 114 106 0.7849 0.6404 0.6887 2.44e-44 6qb7-a1-m1-cA_6qb7-a1-m1-cB
7 6m8s-a1-m1-cB 101 106 0.7419 0.6832 0.6509 3.46e-42 6m8s-a1-m1-cB_6m8s-a1-m1-cO
8 2y2w-a2-m1-cF 518 16 0.0968 0.0174 0.5625 7.4 2y2w-a2-m1-cF_2y2w-a2-m1-cE
9 2y2w-a2-m1-cE 519 16 0.0968 0.0173 0.5625 7.4 2y2w-a2-m1-cF_2y2w-a2-m1-cE
10 6h56-a1-m1-cA 181 25 0.1183 0.0608 0.4400 8.3 6h56-a1-m1-cB_6h56-a1-m1-cA
11 6h56-a1-m1-cB 179 25 0.1183 0.0615 0.4400 8.9 6h56-a1-m1-cB_6h56-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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