Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=43)
RSNDSSDPLVVAANIIGILHLILWILDRLFFKSIYRFFEHGLK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2n70-a1-m1-cD 43 43 1.0000 1.0000 1.0000 1.50e-25 2n70-a1-m1-cA_2n70-a1-m1-cD, 2n70-a1-m1-cC_2n70-a1-m1-cD
2 2n70-a1-m1-cC 43 43 1.0000 1.0000 1.0000 1.50e-25 2n70-a1-m1-cA_2n70-a1-m1-cC, 2n70-a1-m1-cC_2n70-a1-m1-cD
3 2n70-a1-m1-cA 43 43 1.0000 1.0000 1.0000 1.50e-25 2n70-a1-m1-cA_2n70-a1-m1-cC, 2n70-a1-m1-cA_2n70-a1-m1-cD
4 2kih-a1-m1-cD 38 38 0.8837 1.0000 1.0000 1.44e-21 2kih-a1-m1-cC_2kih-a1-m1-cD
5 2kih-a1-m1-cC 38 38 0.8837 1.0000 1.0000 1.44e-21 2kih-a1-m1-cB_2kih-a1-m1-cC, 2kih-a1-m1-cC_2kih-a1-m1-cD
6 2kih-a1-m1-cB 38 38 0.8837 1.0000 1.0000 1.44e-21 2kih-a1-m1-cB_2kih-a1-m1-cC
7 2l0j-a1-m1-cC 41 39 0.8837 0.9268 0.9744 1.82e-21 2l0j-a1-m1-cB_2l0j-a1-m1-cC
8 2l0j-a1-m1-cB 41 39 0.8837 0.9268 0.9744 1.82e-21 2l0j-a1-m1-cB_2l0j-a1-m1-cC
9 2kwx-a1-m1-cD 38 38 0.8372 0.9474 0.9474 2.68e-20 2kwx-a1-m1-cC_2kwx-a1-m1-cD
10 2kwx-a1-m1-cC 38 38 0.8372 0.9474 0.9474 2.68e-20 2kwx-a1-m1-cC_2kwx-a1-m1-cD
11 6oug-a1-m1-cD 34 34 0.7442 0.9412 0.9412 5.87e-17 6oug-a1-m1-cC_6oug-a1-m1-cD
12 6oug-a1-m1-cC 34 34 0.7442 0.9412 0.9412 5.87e-17 6oug-a1-m1-cC_6oug-a1-m1-cD
13 6mjh-a1-m1-cC 25 25 0.5814 1.0000 1.0000 1.17e-10 6mjh-a1-m1-cB_6mjh-a1-m1-cC
14 6mjh-a1-m1-cB 25 25 0.5814 1.0000 1.0000 1.17e-10 6mjh-a1-m1-cB_6mjh-a1-m1-cC
15 6boc-a1-m1-cD 25 25 0.5581 0.9600 0.9600 6.23e-10 6boc-a1-m1-cA_6boc-a1-m1-cD
16 6boc-a1-m1-cA 25 25 0.5581 0.9600 0.9600 6.23e-10 6boc-a1-m1-cA_6boc-a1-m1-cD
17 4qkl-a1-m4-cA 25 25 0.5581 0.9600 0.9600 6.23e-10 4qkl-a1-m2-cA_4qkl-a1-m4-cA
18 4qkl-a1-m2-cA 25 25 0.5581 0.9600 0.9600 6.23e-10 4qkl-a1-m2-cA_4qkl-a1-m4-cA
19 2kqt-a1-m1-cD 25 25 0.5581 0.9600 0.9600 6.23e-10 2kqt-a1-m1-cC_2kqt-a1-m1-cD
20 2kqt-a1-m1-cC 25 25 0.5581 0.9600 0.9600 6.23e-10 2kqt-a1-m1-cC_2kqt-a1-m1-cD
21 6us8-a4-m1-cM 24 24 0.5349 0.9583 0.9583 3.08e-09 6us8-a4-m1-cN_6us8-a4-m1-cM
22 2kad-a1-m1-cD 25 25 0.5349 0.9200 0.9200 3.31e-09 2kad-a1-m1-cB_2kad-a1-m1-cD
23 2kad-a1-m1-cB 25 25 0.5349 0.9200 0.9200 3.31e-09 2kad-a1-m1-cB_2kad-a1-m1-cD
24 6us8-a4-m1-cP 23 23 0.5116 0.9565 0.9565 1.64e-08 6us8-a4-m1-cO_6us8-a4-m1-cP
25 6us8-a4-m1-cO 23 23 0.5116 0.9565 0.9565 1.64e-08 6us8-a4-m1-cO_6us8-a4-m1-cP
26 6us8-a4-m1-cN 23 23 0.5116 0.9565 0.9565 1.64e-08 6us8-a4-m1-cN_6us8-a4-m1-cM
27 6mpn-a1-m1-cB 22 22 0.4419 0.8636 0.8636 7.80e-06 6mpn-a1-m1-cA_6mpn-a1-m1-cB
28 6mpn-a1-m1-cA 22 22 0.4419 0.8636 0.8636 7.80e-06 6mpn-a1-m1-cA_6mpn-a1-m1-cB
29 2ljc-a1-m1-cB 30 24 0.3953 0.5667 0.7083 2.51e-05 2ljc-a1-m1-cA_2ljc-a1-m1-cB
30 2ljc-a1-m1-cA 30 24 0.3953 0.5667 0.7083 2.51e-05 2ljc-a1-m1-cA_2ljc-a1-m1-cB
31 2ljb-a1-m1-cD 30 24 0.3953 0.5667 0.7083 2.51e-05 2ljb-a1-m1-cC_2ljb-a1-m1-cD
32 2ljb-a1-m1-cC 30 24 0.3953 0.5667 0.7083 2.51e-05 2ljb-a1-m1-cC_2ljb-a1-m1-cD
33 2h95-a1-m1-cD 18 18 0.3953 0.9444 0.9444 5.91e-04 2h95-a1-m1-cC_2h95-a1-m1-cD
34 2h95-a1-m1-cC 18 18 0.3953 0.9444 0.9444 5.91e-04 2h95-a1-m1-cC_2h95-a1-m1-cD
35 3bhn-a1-m2-cA 208 29 0.2558 0.0529 0.3793 1.6 3bhn-a1-m1-cA_3bhn-a1-m2-cA
36 3bhn-a1-m1-cA 208 29 0.2558 0.0529 0.3793 1.6 3bhn-a1-m1-cA_3bhn-a1-m2-cA
37 6c62-a2-m4-cB 456 30 0.2558 0.0241 0.3667 2.5 6c62-a2-m3-cA_6c62-a2-m4-cB
38 6c62-a2-m3-cA 456 30 0.2558 0.0241 0.3667 2.5 6c62-a2-m3-cA_6c62-a2-m4-cB
39 6slf-a1-m1-cD 395 23 0.2558 0.0278 0.4783 6.9 6slf-a1-m1-cD_6slf-a1-m1-cA, 6slf-a1-m1-cD_6slf-a1-m1-cB, 6slf-a1-m1-cD_6slf-a1-m1-cC
40 6slf-a1-m1-cC 396 23 0.2558 0.0278 0.4783 6.9 6slf-a1-m1-cD_6slf-a1-m1-cC
41 6slf-a1-m1-cB 396 23 0.2558 0.0278 0.4783 6.9 6slf-a1-m1-cD_6slf-a1-m1-cB
42 6slf-a1-m1-cA 398 23 0.2558 0.0276 0.4783 6.9 6slf-a1-m1-cD_6slf-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600