Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
RTCNKTFSDQSKICPPGENICYTKTWCDAFCSQRGKRVELGCAATCPKVKAGVEIKCCST
DNCN

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4lft-a1-m1-cA 64 64 1.0000 1.0000 1.0000 2.75e-42 4lft-a1-m1-cA_4lft-a1-m1-cB
2 4lft-a1-m1-cB 72 64 1.0000 0.8889 1.0000 4.17e-42 4lft-a1-m1-cA_4lft-a1-m1-cB
3 6zfm-a1-m1-cE 65 56 0.6875 0.6769 0.7857 4.09e-25 6zfm-a1-m1-cE_6zfm-a1-m1-cA
4 4aea-a2-m2-cB 67 54 0.6719 0.6418 0.7963 1.29e-24 4aea-a2-m1-cB_4aea-a2-m2-cB
5 4aea-a2-m1-cB 67 54 0.6719 0.6418 0.7963 1.29e-24 4aea-a2-m1-cB_4aea-a2-m2-cB
6 6zfm-a1-m1-cD 71 54 0.6719 0.6056 0.7963 1.69e-24 6zfm-a1-m1-cA_6zfm-a1-m1-cD
7 6zfm-a1-m1-cA 71 54 0.6719 0.6056 0.7963 1.69e-24 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
8 2ctx-a1-m2-cA 71 54 0.6719 0.6056 0.7963 1.69e-24 2ctx-a1-m1-cA_2ctx-a1-m2-cA
9 2ctx-a1-m1-cA 71 54 0.6719 0.6056 0.7963 1.69e-24 2ctx-a1-m1-cA_2ctx-a1-m2-cA
10 2abx-a1-m1-cB 74 59 0.6094 0.5270 0.6610 2.75e-23 2abx-a1-m1-cA_2abx-a1-m1-cB
11 2abx-a1-m1-cA 74 59 0.6094 0.5270 0.6610 2.75e-23 2abx-a1-m1-cA_2abx-a1-m1-cB
12 1v6p-a1-m1-cB 62 51 0.4219 0.4355 0.5294 1.12e-09 1v6p-a1-m1-cA_1v6p-a1-m1-cB
13 1v6p-a1-m1-cA 62 51 0.4219 0.4355 0.5294 1.12e-09 1v6p-a1-m1-cA_1v6p-a1-m1-cB
14 1qkd-a1-m1-cB 62 54 0.3750 0.3871 0.4444 1.00e-08 1qkd-a1-m1-cA_1qkd-a1-m1-cB
15 1qkd-a1-m1-cA 62 54 0.3750 0.3871 0.4444 1.00e-08 1qkd-a1-m1-cA_1qkd-a1-m1-cB
16 1cdt-a1-m1-cB 60 62 0.4062 0.4333 0.4194 1.87e-08 1cdt-a1-m1-cA_1cdt-a1-m1-cB
17 1cdt-a1-m1-cA 60 62 0.4062 0.4333 0.4194 1.87e-08 1cdt-a1-m1-cA_1cdt-a1-m1-cB
18 1ff4-a2-m3-cA 65 51 0.3594 0.3538 0.4510 5.89e-08 1ff4-a2-m1-cA_1ff4-a2-m3-cA
19 1ff4-a2-m1-cA 65 51 0.3594 0.3538 0.4510 5.89e-08 1ff4-a2-m1-cA_1ff4-a2-m3-cA
20 1ff4-a1-m2-cA 65 51 0.3594 0.3538 0.4510 5.89e-08 1ff4-a1-m1-cA_1ff4-a1-m2-cA
21 1ff4-a1-m1-cA 65 51 0.3594 0.3538 0.4510 5.89e-08 1ff4-a1-m1-cA_1ff4-a1-m2-cA
22 4zqy-a2-m1-cC 65 59 0.4062 0.4000 0.4407 7.92e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
23 4zqy-a2-m1-cB 65 59 0.4062 0.4000 0.4407 7.92e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
24 4om5-a1-m1-cC 60 64 0.4062 0.4333 0.4062 2.31e-07 4om5-a1-m1-cA_4om5-a1-m1-cC
25 4om5-a1-m1-cB 60 64 0.4062 0.4333 0.4062 2.31e-07 4om5-a1-m1-cA_4om5-a1-m1-cB
26 4om5-a1-m1-cA 60 64 0.4062 0.4333 0.4062 2.31e-07 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
27 3neq-a3-m2-cA 66 62 0.4219 0.4091 0.4355 7.18e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
28 3neq-a3-m1-cB 66 62 0.4219 0.4091 0.4355 7.18e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
29 4do8-a3-m2-cB 66 64 0.3906 0.3788 0.3906 8.73e-07 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
30 4do8-a3-m2-cA 66 64 0.3906 0.3788 0.3906 8.73e-07 4do8-a3-m2-cA_4do8-a3-m2-cB
31 4do8-a3-m1-cB 66 64 0.3906 0.3788 0.3906 8.73e-07 4do8-a3-m1-cB_4do8-a3-m2-cB
32 4do8-a3-m1-cA 66 64 0.3906 0.3788 0.3906 8.73e-07 4do8-a3-m1-cA_4do8-a3-m2-cB
33 4om4-a1-m1-cE 60 62 0.3906 0.4167 0.4032 1.14e-06 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
34 4om4-a1-m1-cD 60 62 0.3906 0.4167 0.4032 1.14e-06 4om4-a1-m1-cD_4om4-a1-m1-cE
35 4om4-a1-m1-cC 60 62 0.3906 0.4167 0.4032 1.14e-06 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
36 4om4-a1-m1-cB 60 62 0.3906 0.4167 0.4032 1.14e-06 4om4-a1-m1-cA_4om4-a1-m1-cB
37 4om4-a1-m1-cA 60 62 0.3906 0.4167 0.4032 1.14e-06 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
38 3hh7-a1-m1-cB 65 60 0.3438 0.3385 0.3667 2.71e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
39 3hh7-a1-m1-cA 65 60 0.3438 0.3385 0.3667 2.71e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
40 1xt3-a1-m2-cB 60 62 0.4062 0.4333 0.4194 6.81e-06 1xt3-a1-m1-cA_1xt3-a1-m2-cB
41 1xt3-a1-m1-cA 60 62 0.4062 0.4333 0.4194 6.81e-06 1xt3-a1-m1-cA_1xt3-a1-m2-cB
42 3vts-a1-m1-cB 61 61 0.3438 0.3607 0.3607 6.95e-06 3vts-a1-m1-cA_3vts-a1-m1-cB
43 3vts-a1-m1-cA 61 61 0.3438 0.3607 0.3607 6.95e-06 3vts-a1-m1-cA_3vts-a1-m1-cB
44 1tgx-a4-m15-cC 60 62 0.3594 0.3833 0.3710 1.15e-05 1tgx-a4-m14-cB_1tgx-a4-m15-cC
45 1tgx-a4-m14-cB 60 62 0.3594 0.3833 0.3710 1.15e-05 1tgx-a4-m14-cB_1tgx-a4-m15-cC
46 1tgx-a3-m9-cA 60 62 0.3594 0.3833 0.3710 1.15e-05 1tgx-a3-m10-cB_1tgx-a3-m9-cA
47 1tgx-a3-m10-cB 60 62 0.3594 0.3833 0.3710 1.15e-05 1tgx-a3-m10-cB_1tgx-a3-m9-cA
48 1tgx-a1-m4-cC 60 62 0.3594 0.3833 0.3710 1.15e-05 1tgx-a1-m4-cA_1tgx-a1-m4-cC
49 1tgx-a1-m4-cA 60 62 0.3594 0.3833 0.3710 1.15e-05 1tgx-a1-m4-cA_1tgx-a1-m4-cC
50 1kxi-a1-m1-cB 62 53 0.3594 0.3710 0.4340 3.03e-05 1kxi-a1-m1-cA_1kxi-a1-m1-cB
51 1kxi-a1-m1-cA 62 53 0.3594 0.3710 0.4340 3.03e-05 1kxi-a1-m1-cA_1kxi-a1-m1-cB
52 5xwe-a1-m1-cB 50 58 0.2812 0.3600 0.3103 1.78e-04 5xwe-a1-m1-cB_5xwe-a1-m1-cA
53 7c28-a1-m1-cB 59 58 0.3438 0.3729 0.3793 3.12e-04 7c28-a1-m1-cB_7c28-a1-m1-cA
54 5xwe-a1-m1-cA 51 57 0.2812 0.3529 0.3158 3.53e-04 5xwe-a1-m1-cB_5xwe-a1-m1-cA
55 7c28-a1-m1-cA 65 51 0.3281 0.3231 0.4118 0.002 7c28-a1-m1-cB_7c28-a1-m1-cA
56 4bdt-a2-m6-cB 61 49 0.2812 0.2951 0.3673 0.41 4bdt-a2-m4-cB_4bdt-a2-m6-cB
57 4bdt-a2-m4-cB 61 49 0.2812 0.2951 0.3673 0.41 4bdt-a2-m4-cB_4bdt-a2-m6-cB
58 1fsc-a1-m2-cA 61 49 0.2812 0.2951 0.3673 0.41 1fsc-a1-m1-cA_1fsc-a1-m2-cA
59 1fsc-a1-m1-cA 61 49 0.2812 0.2951 0.3673 0.41 1fsc-a1-m1-cA_1fsc-a1-m2-cA
60 7en2-a1-m1-cA 1321 26 0.1719 0.0083 0.4231 4.5 7en2-a1-m1-cA_7en2-a1-m1-cB
61 7emy-a1-m1-cB 1334 26 0.1719 0.0082 0.4231 4.5 7emy-a1-m1-cA_7emy-a1-m1-cB
62 7emy-a1-m1-cA 1334 26 0.1719 0.0082 0.4231 4.5 7emy-a1-m1-cA_7emy-a1-m1-cB
63 7en2-a1-m1-cB 1410 26 0.1719 0.0078 0.4231 4.5 7en2-a1-m1-cA_7en2-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600