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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
RTCNKTFSDQSKICPPGENICYTKTWCDAFCSQRGKRVELGCAATCPKVKAGVEIKCCST
DNCNKFQFGKPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4lft-a1-m1-cB 72 72 1.0000 1.0000 1.0000 1.65e-48 4lft-a1-m1-cA_4lft-a1-m1-cB
2 4lft-a1-m1-cA 64 64 0.8889 1.0000 1.0000 4.69e-42 4lft-a1-m1-cA_4lft-a1-m1-cB
3 6zfm-a1-m1-cE 65 58 0.6250 0.6923 0.7759 5.02e-26 6zfm-a1-m1-cE_6zfm-a1-m1-cA
4 4aea-a2-m2-cB 67 56 0.6111 0.6567 0.7857 1.69e-25 4aea-a2-m1-cB_4aea-a2-m2-cB
5 4aea-a2-m1-cB 67 56 0.6111 0.6567 0.7857 1.69e-25 4aea-a2-m1-cB_4aea-a2-m2-cB
6 6zfm-a1-m1-cD 71 56 0.6111 0.6197 0.7857 2.17e-25 6zfm-a1-m1-cA_6zfm-a1-m1-cD
7 6zfm-a1-m1-cA 71 56 0.6111 0.6197 0.7857 2.17e-25 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
8 2ctx-a1-m2-cA 71 56 0.6111 0.6197 0.7857 2.17e-25 2ctx-a1-m1-cA_2ctx-a1-m2-cA
9 2ctx-a1-m1-cA 71 56 0.6111 0.6197 0.7857 2.17e-25 2ctx-a1-m1-cA_2ctx-a1-m2-cA
10 2abx-a1-m1-cB 74 60 0.5417 0.5270 0.6500 3.10e-23 2abx-a1-m1-cA_2abx-a1-m1-cB
11 2abx-a1-m1-cA 74 60 0.5417 0.5270 0.6500 3.10e-23 2abx-a1-m1-cA_2abx-a1-m1-cB
12 1v6p-a1-m1-cB 62 51 0.3750 0.4355 0.5294 1.54e-09 1v6p-a1-m1-cA_1v6p-a1-m1-cB
13 1v6p-a1-m1-cA 62 51 0.3750 0.4355 0.5294 1.54e-09 1v6p-a1-m1-cA_1v6p-a1-m1-cB
14 1qkd-a1-m1-cB 62 54 0.3333 0.3871 0.4444 1.46e-08 1qkd-a1-m1-cA_1qkd-a1-m1-cB
15 1qkd-a1-m1-cA 62 54 0.3333 0.3871 0.4444 1.46e-08 1qkd-a1-m1-cA_1qkd-a1-m1-cB
16 1cdt-a1-m1-cB 60 62 0.3611 0.4333 0.4194 2.40e-08 1cdt-a1-m1-cA_1cdt-a1-m1-cB
17 1cdt-a1-m1-cA 60 62 0.3611 0.4333 0.4194 2.40e-08 1cdt-a1-m1-cA_1cdt-a1-m1-cB
18 4zqy-a2-m1-cC 65 60 0.3611 0.4000 0.4333 6.86e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
19 4zqy-a2-m1-cB 65 60 0.3611 0.4000 0.4333 6.86e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
20 1ff4-a2-m3-cA 65 51 0.3194 0.3538 0.4510 9.94e-08 1ff4-a2-m1-cA_1ff4-a2-m3-cA
21 1ff4-a2-m1-cA 65 51 0.3194 0.3538 0.4510 9.94e-08 1ff4-a2-m1-cA_1ff4-a2-m3-cA
22 1ff4-a1-m2-cA 65 51 0.3194 0.3538 0.4510 9.94e-08 1ff4-a1-m1-cA_1ff4-a1-m2-cA
23 1ff4-a1-m1-cA 65 51 0.3194 0.3538 0.4510 9.94e-08 1ff4-a1-m1-cA_1ff4-a1-m2-cA
24 4om5-a1-m1-cC 60 64 0.3611 0.4333 0.4062 3.48e-07 4om5-a1-m1-cA_4om5-a1-m1-cC
25 4om5-a1-m1-cB 60 64 0.3611 0.4333 0.4062 3.48e-07 4om5-a1-m1-cA_4om5-a1-m1-cB
26 4om5-a1-m1-cA 60 64 0.3611 0.4333 0.4062 3.48e-07 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
27 3neq-a3-m2-cA 66 63 0.3889 0.4242 0.4444 3.52e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
28 3neq-a3-m1-cB 66 63 0.3889 0.4242 0.4444 3.52e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
29 4do8-a3-m2-cB 66 65 0.3472 0.3788 0.3846 1.14e-06 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
30 4do8-a3-m2-cA 66 65 0.3472 0.3788 0.3846 1.14e-06 4do8-a3-m2-cA_4do8-a3-m2-cB
31 4do8-a3-m1-cB 66 65 0.3472 0.3788 0.3846 1.14e-06 4do8-a3-m1-cB_4do8-a3-m2-cB
32 4do8-a3-m1-cA 66 65 0.3472 0.3788 0.3846 1.14e-06 4do8-a3-m1-cA_4do8-a3-m2-cB
33 4om4-a1-m1-cE 60 62 0.3472 0.4167 0.4032 1.47e-06 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
34 4om4-a1-m1-cD 60 62 0.3472 0.4167 0.4032 1.47e-06 4om4-a1-m1-cD_4om4-a1-m1-cE
35 4om4-a1-m1-cC 60 62 0.3472 0.4167 0.4032 1.47e-06 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
36 4om4-a1-m1-cB 60 62 0.3472 0.4167 0.4032 1.47e-06 4om4-a1-m1-cA_4om4-a1-m1-cB
37 4om4-a1-m1-cA 60 62 0.3472 0.4167 0.4032 1.47e-06 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
38 3hh7-a1-m1-cB 65 61 0.3056 0.3385 0.3607 3.00e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
39 3hh7-a1-m1-cA 65 61 0.3056 0.3385 0.3607 3.00e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
40 3vts-a1-m1-cB 61 61 0.3056 0.3607 0.3607 9.86e-06 3vts-a1-m1-cA_3vts-a1-m1-cB
41 3vts-a1-m1-cA 61 61 0.3056 0.3607 0.3607 9.86e-06 3vts-a1-m1-cA_3vts-a1-m1-cB
42 1xt3-a1-m2-cB 60 62 0.3611 0.4333 0.4194 1.14e-05 1xt3-a1-m1-cA_1xt3-a1-m2-cB
43 1xt3-a1-m1-cA 60 62 0.3611 0.4333 0.4194 1.14e-05 1xt3-a1-m1-cA_1xt3-a1-m2-cB
44 1tgx-a4-m15-cC 60 62 0.3194 0.3833 0.3710 1.57e-05 1tgx-a4-m14-cB_1tgx-a4-m15-cC
45 1tgx-a4-m14-cB 60 62 0.3194 0.3833 0.3710 1.57e-05 1tgx-a4-m14-cB_1tgx-a4-m15-cC
46 1tgx-a3-m9-cA 60 62 0.3194 0.3833 0.3710 1.57e-05 1tgx-a3-m10-cB_1tgx-a3-m9-cA
47 1tgx-a3-m10-cB 60 62 0.3194 0.3833 0.3710 1.57e-05 1tgx-a3-m10-cB_1tgx-a3-m9-cA
48 1tgx-a1-m4-cC 60 62 0.3194 0.3833 0.3710 1.57e-05 1tgx-a1-m4-cA_1tgx-a1-m4-cC
49 1tgx-a1-m4-cA 60 62 0.3194 0.3833 0.3710 1.57e-05 1tgx-a1-m4-cA_1tgx-a1-m4-cC
50 1kxi-a1-m1-cB 62 53 0.3194 0.3710 0.4340 5.54e-05 1kxi-a1-m1-cA_1kxi-a1-m1-cB
51 1kxi-a1-m1-cA 62 53 0.3194 0.3710 0.4340 5.54e-05 1kxi-a1-m1-cA_1kxi-a1-m1-cB
52 5xwe-a1-m1-cB 50 59 0.2639 0.3800 0.3220 5.87e-05 5xwe-a1-m1-cB_5xwe-a1-m1-cA
53 7c28-a1-m1-cB 59 59 0.3194 0.3898 0.3898 1.04e-04 7c28-a1-m1-cB_7c28-a1-m1-cA
54 5xwe-a1-m1-cA 51 57 0.2639 0.3725 0.3333 1.16e-04 5xwe-a1-m1-cB_5xwe-a1-m1-cA
55 7c28-a1-m1-cA 65 52 0.3056 0.3385 0.4231 5.68e-04 7c28-a1-m1-cB_7c28-a1-m1-cA
56 4bdt-a2-m6-cB 61 49 0.2500 0.2951 0.3673 0.77 4bdt-a2-m4-cB_4bdt-a2-m6-cB
57 4bdt-a2-m4-cB 61 49 0.2500 0.2951 0.3673 0.77 4bdt-a2-m4-cB_4bdt-a2-m6-cB
58 1fsc-a1-m2-cA 61 49 0.2500 0.2951 0.3673 0.77 1fsc-a1-m1-cA_1fsc-a1-m2-cA
59 1fsc-a1-m1-cA 61 49 0.2500 0.2951 0.3673 0.77 1fsc-a1-m1-cA_1fsc-a1-m2-cA
60 2gef-a5-m1-cB 199 45 0.1667 0.0603 0.2667 1.4 2gef-a5-m1-cA_2gef-a5-m1-cB
61 2gef-a4-m9-cB 199 45 0.1667 0.0603 0.2667 1.4 2gef-a4-m1-cA_2gef-a4-m9-cB
62 2gef-a5-m1-cA 194 45 0.1667 0.0619 0.2667 1.4 2gef-a5-m1-cA_2gef-a5-m1-cB
63 2gef-a4-m1-cA 194 45 0.1667 0.0619 0.2667 1.4 2gef-a4-m1-cA_2gef-a4-m9-cB
64 2gef-a3-m9-cA 194 45 0.1667 0.0619 0.2667 1.4 2gef-a3-m10-cA_2gef-a3-m9-cA
65 2gef-a3-m10-cA 194 45 0.1667 0.0619 0.2667 1.4 2gef-a3-m10-cA_2gef-a3-m9-cA
66 7en2-a1-m1-cA 1321 26 0.1528 0.0083 0.4231 6.0 7en2-a1-m1-cA_7en2-a1-m1-cB
67 7emy-a1-m1-cB 1334 26 0.1528 0.0082 0.4231 6.0 7emy-a1-m1-cA_7emy-a1-m1-cB
68 7emy-a1-m1-cA 1334 26 0.1528 0.0082 0.4231 6.0 7emy-a1-m1-cA_7emy-a1-m1-cB
69 7en2-a1-m1-cB 1410 26 0.1528 0.0078 0.4231 6.0 7en2-a1-m1-cA_7en2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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