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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
RTHGTFPMHQLGNVIKGIVDQEGVATAYTLGMMLSGQNYQLVSGIIRGYLPGQAVVTALQ
QRLDQEIDDQTRAETFIQHLNAVYEILGLNARGQSIRLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5m1g-a1-m1-cB 99 99 1.0000 1.0000 1.0000 9.91e-69 5m1g-a1-m1-cA_5m1g-a1-m1-cB
2 5m1g-a1-m1-cA 99 99 1.0000 1.0000 1.0000 9.91e-69 5m1g-a1-m1-cA_5m1g-a1-m1-cB
3 1zyz-a3-m1-cA 776 46 0.1818 0.0232 0.3913 1.3 1zyz-a3-m4-cB_1zyz-a3-m1-cA
4 7dxi-a1-m1-cB 371 44 0.1616 0.0431 0.3636 1.5 7dxi-a1-m1-cA_7dxi-a1-m1-cB
5 7dxi-a1-m1-cA 371 44 0.1616 0.0431 0.3636 1.5 7dxi-a1-m1-cA_7dxi-a1-m1-cB
6 7ms2-a1-m1-cB 744 103 0.3030 0.0403 0.2913 2.6 7ms2-a1-m1-cB_7ms2-a1-m1-cA
7 7ms2-a1-m1-cA 749 103 0.3030 0.0401 0.2913 2.6 7ms2-a1-m1-cB_7ms2-a1-m1-cA
8 6uzi-a2-m1-cD 466 63 0.1818 0.0386 0.2857 4.6 6uzi-a2-m1-cD_6uzi-a2-m1-cC
9 6uzi-a2-m1-cC 470 63 0.1818 0.0383 0.2857 4.8 6uzi-a2-m1-cD_6uzi-a2-m1-cC
10 6e1j-a1-m1-cB 408 62 0.1717 0.0417 0.2742 8.4 6e1j-a1-m1-cB_6e1j-a1-m1-cA
11 6e1j-a1-m1-cA 409 62 0.1717 0.0416 0.2742 8.4 6e1j-a1-m1-cB_6e1j-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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