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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
RTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPGWKLVYVDYESDVLLV
GDDPWEEFVGCVRCIRILSPTEVQQMSE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4chk-a6-m1-cG 88 88 1.0000 1.0000 1.0000 1.29e-61 4chk-a6-m1-cG_4chk-a6-m4-cB
2 4chk-a6-m4-cB 91 90 0.9886 0.9560 0.9667 9.34e-59 4chk-a6-m1-cG_4chk-a6-m4-cB
3 4j1y-a3-m2-cB 362 32 0.1364 0.0331 0.3750 3.0 4j1y-a3-m2-cB_4j1y-a3-m1-cA
4 4j1y-a3-m1-cA 378 32 0.1364 0.0317 0.3750 3.1 4j1y-a3-m2-cB_4j1y-a3-m1-cA
5 3gei-a2-m1-cB 424 37 0.1364 0.0283 0.3243 6.3 3gei-a2-m1-cC_3gei-a2-m1-cB
6 3tqp-a1-m1-cB 397 19 0.1250 0.0277 0.5789 7.4 3tqp-a1-m1-cB_3tqp-a1-m1-cA
7 3tqp-a1-m1-cA 411 19 0.1250 0.0268 0.5789 7.4 3tqp-a1-m1-cB_3tqp-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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