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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
RVIVFFDLPVITPENRHNYSVFRKYLIKSGFIMQQKSVYSKLVLNLTNRDSIVKSIEKNK
PPEGLVEVLTVTEKQYAKMEIIIGESKTEYL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6jhz-a1-m1-cA 93 91 1.0000 0.9785 1.0000 5.64e-62 6jhz-a1-m1-cB_6jhz-a1-m1-cA
2 6jhz-a1-m1-cB 91 91 1.0000 1.0000 1.0000 5.98e-62 6jhz-a1-m1-cB_6jhz-a1-m1-cA
3 6qxt-a1-m1-cx 103 86 0.4505 0.3981 0.4767 3.88e-24 6qxt-a1-m1-cw_6qxt-a1-m1-cx
4 6qxt-a1-m1-cw 103 86 0.4505 0.3981 0.4767 3.88e-24 6qxt-a1-m1-cw_6qxt-a1-m1-cx
5 5zyf-a1-m1-cA 88 85 0.4286 0.4432 0.4588 1.82e-23 5zyf-a1-m1-cB_5zyf-a1-m1-cA
6 5zyf-a1-m1-cB 87 85 0.4286 0.4483 0.4588 1.87e-23 5zyf-a1-m1-cB_5zyf-a1-m1-cA
7 5xvo-a3-m1-cM 104 85 0.4176 0.3654 0.4471 5.67e-23 5xvo-a3-m1-cM_5xvo-a3-m1-cN
8 5xvo-a3-m1-cN 105 85 0.4176 0.3619 0.4471 6.08e-23 5xvo-a3-m1-cM_5xvo-a3-m1-cN
9 7umz-a1-m1-cD 3927 81 0.2418 0.0056 0.2716 1.1 7umz-a1-m1-cC_7umz-a1-m1-cD
10 7umz-a1-m1-cC 3927 81 0.2418 0.0056 0.2716 1.1 7umz-a1-m1-cC_7umz-a1-m1-cD
11 7k0t-a1-m1-cD 4105 81 0.2418 0.0054 0.2716 1.1 7k0t-a1-m1-cC_7k0t-a1-m1-cD
12 7k0t-a1-m1-cC 4105 81 0.2418 0.0054 0.2716 1.1 7k0t-a1-m1-cC_7k0t-a1-m1-cD
13 7tdj-a1-m1-cD 4133 81 0.2418 0.0053 0.2716 1.1 7tdj-a1-m1-cC_7tdj-a1-m1-cD
14 7tdj-a1-m1-cC 4133 81 0.2418 0.0053 0.2716 1.1 7tdj-a1-m1-cC_7tdj-a1-m1-cD
15 6foo-a1-m1-cD 4168 81 0.2418 0.0053 0.2716 1.1 6foo-a1-m1-cC_6foo-a1-m1-cD
16 6foo-a1-m1-cC 4168 81 0.2418 0.0053 0.2716 1.1 6foo-a1-m1-cC_6foo-a1-m1-cD
17 6wot-a1-m1-cD 4197 81 0.2418 0.0052 0.2716 1.2 6wot-a1-m1-cB_6wot-a1-m1-cD, 6wot-a1-m1-cC_6wot-a1-m1-cD
18 6wot-a1-m1-cC 4197 81 0.2418 0.0052 0.2716 1.2 6wot-a1-m1-cC_6wot-a1-m1-cD
19 6wot-a1-m1-cB 4197 81 0.2418 0.0052 0.2716 1.2 6wot-a1-m1-cB_6wot-a1-m1-cD
20 7m6a-a1-m1-cI 4306 81 0.2418 0.0051 0.2716 1.3 7m6a-a1-m1-cG_7m6a-a1-m1-cI
21 7m6a-a1-m1-cG 4306 81 0.2418 0.0051 0.2716 1.3 7m6a-a1-m1-cG_7m6a-a1-m1-cI
22 7t64-a1-m1-cD 4247 81 0.2418 0.0052 0.2716 1.3 7t64-a1-m1-cC_7t64-a1-m1-cD
23 7t64-a1-m1-cC 4247 81 0.2418 0.0052 0.2716 1.3 7t64-a1-m1-cC_7t64-a1-m1-cD
24 7m6l-a1-m1-cI 4299 81 0.2418 0.0051 0.2716 1.3 7m6l-a1-m1-cG_7m6l-a1-m1-cI
25 7m6l-a1-m1-cG 4299 81 0.2418 0.0051 0.2716 1.3 7m6l-a1-m1-cG_7m6l-a1-m1-cI
26 5hla-a1-m2-cA 697 36 0.0989 0.0129 0.2500 7.7 5hla-a1-m1-cA_5hla-a1-m2-cA
27 5hla-a1-m1-cA 697 36 0.0989 0.0129 0.2500 7.7 5hla-a1-m1-cA_5hla-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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