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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
RVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKI
DVIEIVLERPRSLTLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2y4y-a1-m2-cB 76 76 1.0000 1.0000 1.0000 1.16e-49 2y4y-a1-m1-cB_2y4y-a1-m2-cB, 2y4y-a1-m2-cB_2y4y-a1-m2-cC
2 2y4y-a1-m1-cB 76 76 1.0000 1.0000 1.0000 1.16e-49 2y4y-a1-m1-cB_2y4y-a1-m2-cB, 2y4y-a1-m1-cB_2y4y-a1-m2-cD
3 2y4y-a1-m2-cC 79 77 1.0000 0.9620 0.9870 5.95e-48 2y4y-a1-m2-cB_2y4y-a1-m2-cC
4 2y4y-a1-m2-cD 80 77 0.9868 0.9375 0.9740 7.17e-47 2y4y-a1-m1-cB_2y4y-a1-m2-cD
5 2ipc-a2-m1-cD 934 20 0.1447 0.0118 0.5500 1.8 2ipc-a2-m1-cD_2ipc-a2-m1-cC
6 2ipc-a2-m1-cC 939 20 0.1447 0.0117 0.5500 1.9 2ipc-a2-m1-cD_2ipc-a2-m1-cC
7 4atm-a1-m2-cA 221 50 0.2368 0.0814 0.3600 2.8 4atm-a1-m1-cA_4atm-a1-m2-cA
8 4atm-a1-m1-cA 221 50 0.2368 0.0814 0.3600 2.8 4atm-a1-m1-cA_4atm-a1-m2-cA
9 6gun-a2-m2-cC 290 48 0.1974 0.0517 0.3125 4.0 6gun-a2-m2-cC_6gun-a2-m1-cD
10 6gun-a2-m1-cD 298 48 0.1974 0.0503 0.3125 4.0 6gun-a2-m2-cC_6gun-a2-m1-cD
11 5a98-a1-m3-cA 235 18 0.1316 0.0426 0.5556 4.6 5a98-a1-m2-cA_5a98-a1-m3-cA
12 5a98-a1-m2-cA 235 18 0.1316 0.0426 0.5556 4.6 5a98-a1-m2-cA_5a98-a1-m3-cA
13 1nkt-a2-m2-cB 836 36 0.1579 0.0144 0.3333 8.1 1nkt-a2-m1-cB_1nkt-a2-m2-cB, 1nkt-a2-m2-cA_1nkt-a2-m2-cB
14 1nkt-a2-m2-cA 836 36 0.1579 0.0144 0.3333 8.1 1nkt-a2-m2-cA_1nkt-a2-m2-cB
15 1nkt-a2-m1-cB 836 36 0.1579 0.0144 0.3333 8.1 1nkt-a2-m1-cB_1nkt-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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