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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
RVPLTAEELERGQRLGELLRSARGDSVTVAFDAGISVETLRKIETGRIATPAFFTIAAVA
RVLDLSLDDVAAVVTFGPVS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ofy-a1-m1-cA 80 80 1.0000 1.0000 1.0000 2.01e-50 2ofy-a1-m1-cB_2ofy-a1-m1-cA
2 2ofy-a1-m1-cB 78 78 0.9750 1.0000 1.0000 4.44e-49 2ofy-a1-m1-cB_2ofy-a1-m1-cA
3 6nkh-a1-m1-cC 259 50 0.2375 0.0734 0.3800 0.45 6nkh-a1-m1-cD_6nkh-a1-m1-cC
4 6nkh-a1-m1-cA 261 50 0.2375 0.0728 0.3800 0.48 6nkh-a1-m1-cD_6nkh-a1-m1-cA
5 3zkc-a1-m1-cA 61 58 0.2250 0.2951 0.3103 1.1 3zkc-a1-m1-cA_3zkc-a1-m1-cB
6 3zkc-a1-m1-cB 63 58 0.2250 0.2857 0.3103 1.2 3zkc-a1-m1-cA_3zkc-a1-m1-cB
7 6p4u-a2-m2-cA 843 37 0.1875 0.0178 0.4054 1.7 6p4u-a2-m1-cA_6p4u-a2-m2-cA
8 6p4u-a2-m1-cA 843 37 0.1875 0.0178 0.4054 1.7 6p4u-a2-m1-cA_6p4u-a2-m2-cA
9 1b0n-a6-m3-cA 103 57 0.2250 0.1748 0.3158 2.0 1b0n-a6-m1-cA_1b0n-a6-m3-cA
10 1b0n-a6-m1-cA 103 57 0.2250 0.1748 0.3158 2.0 1b0n-a6-m1-cA_1b0n-a6-m3-cA
11 1b0n-a5-m2-cA 103 57 0.2250 0.1748 0.3158 2.0 1b0n-a5-m1-cA_1b0n-a5-m2-cA
12 1b0n-a5-m1-cA 103 57 0.2250 0.1748 0.3158 2.0 1b0n-a5-m1-cA_1b0n-a5-m2-cA
13 6jx7-a1-m1-cC 1245 36 0.1500 0.0096 0.3333 2.3 6jx7-a1-m1-cB_6jx7-a1-m1-cC
14 6jx7-a1-m1-cB 1245 36 0.1500 0.0096 0.3333 2.3 6jx7-a1-m1-cB_6jx7-a1-m1-cC
15 7kmy-a4-m1-cN 465 34 0.1750 0.0301 0.4118 3.3 7kmy-a4-m1-cM_7kmy-a4-m1-cN
16 7kmy-a4-m1-cM 465 34 0.1750 0.0301 0.4118 3.3 7kmy-a4-m1-cM_7kmy-a4-m1-cN
17 4xkj-a1-m1-cB 332 25 0.1250 0.0301 0.4000 5.8 4xkj-a1-m1-cA_4xkj-a1-m1-cB
18 4xkj-a1-m1-cA 332 25 0.1250 0.0301 0.4000 5.8 4xkj-a1-m1-cA_4xkj-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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