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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
RVQAKIEMEFPSEDVAKVVYEAVLYEHLSVPYRRSEIDFKLEGKKIILDIKATDSSALRG
TVNSYLRWIKAAIDVIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3eno-a2-m1-cF 79 77 1.0000 0.9747 1.0000 2.75e-51 3eno-a2-m1-cE_3eno-a2-m1-cF
2 3eno-a2-m1-cE 77 77 1.0000 1.0000 1.0000 2.84e-51 3eno-a2-m1-cE_3eno-a2-m1-cF
3 5jmv-a2-m2-cH 65 77 0.8312 0.9846 0.8312 1.25e-35 5jmv-a2-m1-cH_5jmv-a2-m2-cH
4 5jmv-a2-m1-cH 65 77 0.8312 0.9846 0.8312 1.25e-35 5jmv-a2-m1-cH_5jmv-a2-m2-cH
5 6pll-a2-m1-cB 116 29 0.1558 0.1034 0.4138 2.0 6pll-a2-m1-cB_6pll-a2-m1-cA
6 6pll-a2-m1-cA 118 29 0.1558 0.1017 0.4138 2.1 6pll-a2-m1-cB_6pll-a2-m1-cA
7 7ut0-a1-m1-cA 284 39 0.2078 0.0563 0.4103 3.7 7ut0-a1-m1-cB_7ut0-a1-m1-cA
8 7ut0-a1-m1-cB 282 39 0.2078 0.0567 0.4103 3.8 7ut0-a1-m1-cB_7ut0-a1-m1-cA
9 4du6-a1-m2-cD 216 50 0.1818 0.0648 0.2800 8.0 4du6-a1-m2-cE_4du6-a1-m2-cD
10 4du6-a1-m1-cD 216 50 0.1818 0.0648 0.2800 8.0 4du6-a1-m2-cE_4du6-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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