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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=38)
RWLCIWLSDQTLEDLEKMARREGLSKSEMINVALQHYK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mdv-a1-m1-cB 38 38 1.0000 1.0000 1.0000 9.33e-23 2mdv-a1-m1-cA_2mdv-a1-m1-cB
2 2mdv-a1-m1-cA 38 38 1.0000 1.0000 1.0000 9.33e-23 2mdv-a1-m1-cA_2mdv-a1-m1-cB
3 7wnr-a1-m1-cC 49 34 0.3158 0.2449 0.3529 0.11 7wnr-a1-m1-cB_7wnr-a1-m1-cC
4 7wnr-a1-m1-cB 49 34 0.3158 0.2449 0.3529 0.11 7wnr-a1-m1-cB_7wnr-a1-m1-cC
5 3r90-a1-m1-cH 180 36 0.2895 0.0611 0.3056 1.8 3r90-a1-m1-cH_3r90-a1-m1-cF
6 3r90-a1-m1-cF 181 36 0.2895 0.0608 0.3056 1.8 3r90-a1-m1-cF_3r90-a1-m1-cA, 3r90-a1-m1-cH_3r90-a1-m1-cF
7 3r90-a1-m1-cA 185 36 0.2895 0.0595 0.3056 1.8 3r90-a1-m1-cF_3r90-a1-m1-cA
8 1x93-a1-m1-cB 43 22 0.2368 0.2093 0.4091 2.2 1x93-a1-m1-cA_1x93-a1-m1-cB
9 1x93-a1-m1-cA 43 22 0.2368 0.2093 0.4091 2.2 1x93-a1-m1-cA_1x93-a1-m1-cB
10 3edt-a3-m1-cF 258 32 0.2895 0.0426 0.3438 4.4 3edt-a3-m1-cH_3edt-a3-m1-cF
11 1a3y-a1-m1-cB 147 26 0.1842 0.0476 0.2692 4.5 1a3y-a1-m1-cB_1a3y-a1-m1-cA
12 1a3y-a1-m1-cA 149 26 0.1842 0.0470 0.2692 4.5 1a3y-a1-m1-cB_1a3y-a1-m1-cA
13 6f9i-a1-m1-cB 264 30 0.2632 0.0379 0.3333 6.9 6f9i-a1-m1-cA_6f9i-a1-m1-cB
14 5fjy-a2-m2-cC 267 30 0.2632 0.0375 0.3333 6.9 5fjy-a2-m1-cC_5fjy-a2-m2-cC
15 5fjy-a2-m1-cC 267 30 0.2632 0.0375 0.3333 6.9 5fjy-a2-m1-cC_5fjy-a2-m2-cC
16 6f9i-a1-m1-cA 261 30 0.2632 0.0383 0.3333 7.1 6f9i-a1-m1-cA_6f9i-a1-m1-cB
17 3l6d-a1-m1-cA 287 31 0.2895 0.0383 0.3548 7.7 3l6d-a1-m1-cA_3l6d-a1-m1-cB
18 3l6d-a1-m1-cB 289 31 0.2895 0.0381 0.3548 7.7 3l6d-a1-m1-cA_3l6d-a1-m1-cB
19 6swu-a3-m1-cF 281 30 0.2632 0.0356 0.3333 8.0 6swu-a3-m1-cE_6swu-a3-m1-cF
20 6swu-a3-m1-cE 281 30 0.2632 0.0356 0.3333 8.2 6swu-a3-m1-cE_6swu-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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