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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
RWPPGLAVMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTV
TEPDLKNNRILDELVKSLNFARNHLLQF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2y43-a1-m1-cA 88 88 1.0000 1.0000 1.0000 1.00e-62 2y43-a1-m1-cA_2y43-a1-m1-cB
2 2y43-a1-m1-cB 88 87 0.9886 0.9886 1.0000 7.07e-62 2y43-a1-m1-cA_2y43-a1-m1-cB
3 4ayc-a1-m2-cB 126 46 0.2045 0.1429 0.3913 1.25e-06 4ayc-a1-m2-cB_4ayc-a1-m1-cA
4 4whv-a2-m1-cJ 101 46 0.2045 0.1782 0.3913 1.26e-06 4whv-a2-m1-cI_4whv-a2-m1-cJ
5 4whv-a2-m1-cI 101 46 0.2045 0.1782 0.3913 1.26e-06 4whv-a2-m1-cI_4whv-a2-m1-cJ
6 4ayc-a1-m1-cA 136 45 0.2045 0.1324 0.4000 1.35e-06 4ayc-a1-m2-cB_4ayc-a1-m1-cA
7 3ztg-a1-m1-cB 92 70 0.3068 0.2935 0.3857 1.72e-05 3ztg-a1-m1-cA_3ztg-a1-m1-cB
8 3ztg-a1-m1-cA 92 70 0.3068 0.2935 0.3857 1.72e-05 3ztg-a1-m1-cA_3ztg-a1-m1-cB
9 3lrq-a2-m1-cB 78 72 0.2727 0.3077 0.3333 1.75e-05 3lrq-a2-m1-cB_3lrq-a2-m1-cC
10 3lrq-a2-m1-cC 80 72 0.2727 0.3000 0.3333 2.24e-05 3lrq-a2-m1-cB_3lrq-a2-m1-cC
11 6yxe-a2-m2-cB 72 66 0.2273 0.2778 0.3030 5.10e-04 6yxe-a2-m1-cB_6yxe-a2-m2-cB
12 6yxe-a2-m1-cB 72 66 0.2273 0.2778 0.3030 5.10e-04 6yxe-a2-m1-cB_6yxe-a2-m2-cB
13 5eya-a1-m1-cG 86 77 0.2500 0.2558 0.2857 7.27e-04 5eya-a1-m1-cF_5eya-a1-m1-cG
14 5eya-a1-m1-cF 76 71 0.2386 0.2763 0.2958 0.002 5eya-a1-m1-cF_5eya-a1-m1-cG
15 5h7r-a1-m2-cD 124 45 0.2045 0.1452 0.4000 0.002 5h7r-a1-m1-cD_5h7r-a1-m2-cD
16 5h7r-a1-m1-cD 124 45 0.2045 0.1452 0.4000 0.002 5h7r-a1-m1-cD_5h7r-a1-m2-cD
17 7zj3-a2-m1-cA 86 84 0.2614 0.2674 0.2738 0.006 7zj3-a2-m1-cG_7zj3-a2-m1-cA
18 7zj3-a2-m1-cG 85 84 0.2614 0.2706 0.2738 0.006 7zj3-a2-m1-cG_7zj3-a2-m1-cA
19 5din-a1-m1-cA 120 43 0.1932 0.1417 0.3953 0.012 5din-a1-m1-cA_5din-a1-m1-cB
20 5din-a1-m1-cB 124 43 0.1932 0.1371 0.3953 0.012 5din-a1-m1-cA_5din-a1-m1-cB
21 5zi6-a4-m1-cH 55 47 0.2273 0.3636 0.4255 0.043 5zi6-a4-m1-cG_5zi6-a4-m1-cH
22 5zi6-a4-m1-cG 55 47 0.2273 0.3636 0.4255 0.043 5zi6-a4-m1-cG_5zi6-a4-m1-cH
23 5vnz-a1-m2-cA 108 76 0.2500 0.2037 0.2895 0.095 5vnz-a1-m1-cA_5vnz-a1-m2-cA
24 5vnz-a1-m1-cA 108 76 0.2500 0.2037 0.2895 0.095 5vnz-a1-m1-cA_5vnz-a1-m2-cA
25 4ppe-a2-m2-cB 67 47 0.1818 0.2388 0.3404 0.17 4ppe-a2-m1-cA_4ppe-a2-m2-cB, 4ppe-a2-m1-cB_4ppe-a2-m2-cB, 4ppe-a2-m2-cA_4ppe-a2-m2-cB
26 4ppe-a2-m1-cB 67 47 0.1818 0.2388 0.3404 0.17 4ppe-a2-m1-cB_4ppe-a2-m2-cB
27 4ppe-a2-m2-cA 66 47 0.1818 0.2424 0.3404 0.19 4ppe-a2-m2-cA_4ppe-a2-m2-cB
28 4ppe-a2-m1-cA 66 47 0.1818 0.2424 0.3404 0.19 4ppe-a2-m1-cA_4ppe-a2-m2-cB
29 6fga-a4-m1-cH 77 62 0.2045 0.2338 0.2903 0.33 6fga-a4-m1-cG_6fga-a4-m1-cH
30 6fga-a4-m1-cG 77 62 0.2045 0.2338 0.2903 0.33 6fga-a4-m1-cG_6fga-a4-m1-cH
31 4r7e-a1-m2-cA 69 52 0.1818 0.2319 0.3077 0.67 4r7e-a1-m1-cA_4r7e-a1-m2-cA
32 4r7e-a1-m1-cA 69 52 0.1818 0.2319 0.3077 0.67 4r7e-a1-m1-cA_4r7e-a1-m2-cA
33 4ljq-a6-m2-cD 187 50 0.1932 0.0909 0.3400 0.84 4ljq-a6-m1-cA_4ljq-a6-m2-cD
34 6qaj-a1-m1-cA 439 65 0.1818 0.0364 0.2462 4.7 6qaj-a1-m1-cA_6qaj-a1-m1-cB
35 4kbl-a3-m1-cA 395 50 0.1477 0.0329 0.2600 8.9 4kbl-a3-m1-cB_4kbl-a3-m1-cA
36 5j4f-a1-m1-cA 98 27 0.1023 0.0918 0.3333 10.0 5j4f-a1-m1-cB_5j4f-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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