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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
RWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVREVSSAQKEGLRFQSSAIMALQEATEAY
IVSLMADTNLACIHAKRVTIQPKDIQLALRLRGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kxv-a1-m1-cA 94 94 1.0000 1.0000 1.0000 1.65e-65 6kxv-a1-m1-cA_6kxv-a1-m1-cE
2 6kxv-a1-m1-cE 95 94 1.0000 0.9895 1.0000 1.99e-65 6kxv-a1-m1-cA_6kxv-a1-m1-cE
3 8f86-a1-m1-cE 95 94 0.7234 0.7158 0.7234 2.75e-46 8f86-a1-m1-cE_8f86-a1-m1-cA
4 8f86-a1-m1-cA 107 94 0.7234 0.6355 0.7234 4.00e-46 8f86-a1-m1-cE_8f86-a1-m1-cA
5 4jjn-a1-m1-cE 96 94 0.7234 0.7083 0.7234 1.85e-44 4jjn-a1-m1-cE_4jjn-a1-m1-cA
6 7z0o-a1-m1-cC 97 94 0.7234 0.7010 0.7234 2.80e-44 7z0o-a1-m1-cA_7z0o-a1-m1-cC
7 4jjn-a1-m1-cA 98 94 0.7234 0.6939 0.7234 3.52e-44 4jjn-a1-m1-cE_4jjn-a1-m1-cA
8 7z0o-a1-m1-cA 94 93 0.7128 0.7128 0.7204 1.31e-43 7z0o-a1-m1-cA_7z0o-a1-m1-cC
9 5ay8-a1-m1-cE 96 94 0.6596 0.6458 0.6596 8.52e-40 5ay8-a1-m1-cE_5ay8-a1-m1-cA
10 5ay8-a1-m1-cA 97 94 0.6596 0.6392 0.6596 1.05e-39 5ay8-a1-m1-cE_5ay8-a1-m1-cA
11 5zbx-a1-m1-cE 101 96 0.6170 0.5743 0.6042 3.87e-35 5zbx-a1-m1-cA_5zbx-a1-m1-cE
12 5zbx-a1-m1-cA 95 94 0.5957 0.5895 0.5957 6.69e-34 5zbx-a1-m1-cA_5zbx-a1-m1-cE
13 6uph-a1-m1-cE 97 94 0.5638 0.5464 0.5638 7.46e-32 6uph-a1-m1-cA_6uph-a1-m1-cE
14 7y7i-a1-m1-cE 97 95 0.5638 0.5464 0.5579 8.51e-32 7y7i-a1-m1-cE_7y7i-a1-m1-cA
15 7y7i-a1-m1-cA 102 95 0.5638 0.5196 0.5579 1.24e-31 7y7i-a1-m1-cE_7y7i-a1-m1-cA
16 6uph-a1-m1-cA 93 91 0.5532 0.5591 0.5714 7.48e-31 6uph-a1-m1-cA_6uph-a1-m1-cE
17 2yfw-a2-m1-cE 88 87 0.5638 0.6023 0.6092 7.63e-30 2yfw-a2-m1-cC_2yfw-a2-m1-cE
18 7d69-a1-m1-cE 99 91 0.4894 0.4646 0.5055 2.75e-26 7d69-a1-m1-cA_7d69-a1-m1-cE
19 2yfw-a2-m1-cC 71 75 0.4787 0.6338 0.6000 6.14e-24 2yfw-a2-m1-cC_2yfw-a2-m1-cE
20 7d69-a1-m1-cA 90 83 0.4681 0.4889 0.5301 6.34e-24 7d69-a1-m1-cA_7d69-a1-m1-cE
21 6xwt-a1-m1-cC 74 68 0.2872 0.3649 0.3971 9.43e-10 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.2872 0.3649 0.3971 9.43e-10 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 82 0.2340 0.2157 0.2683 0.002 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 82 0.2340 0.2157 0.2683 0.002 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 1ku5-a1-m1-cB 66 66 0.2021 0.2879 0.2879 0.098 1ku5-a1-m1-cA_1ku5-a1-m1-cB
26 1ku5-a1-m1-cA 66 66 0.2021 0.2879 0.2879 0.098 1ku5-a1-m1-cA_1ku5-a1-m1-cB
27 2eo0-a2-m1-cA 130 32 0.1489 0.1077 0.4375 5.1 2eo0-a2-m1-cB_2eo0-a2-m1-cA
28 2eo0-a1-m1-cA 130 32 0.1489 0.1077 0.4375 5.1 2eo0-a1-m2-cB_2eo0-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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