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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
RWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVREVSSAQKEGLRFQSSAIMALQEATEAY
IVSLMADTNLACIHAKRVTIQPKDIQLALRLRGER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kxv-a1-m1-cE 95 95 1.0000 1.0000 1.0000 4.04e-66 6kxv-a1-m1-cA_6kxv-a1-m1-cE
2 6kxv-a1-m1-cA 94 94 0.9895 1.0000 1.0000 2.01e-65 6kxv-a1-m1-cA_6kxv-a1-m1-cE
3 8f86-a1-m1-cE 95 95 0.7263 0.7263 0.7263 7.11e-47 8f86-a1-m1-cE_8f86-a1-m1-cA
4 8f86-a1-m1-cA 107 95 0.7263 0.6449 0.7263 9.27e-47 8f86-a1-m1-cE_8f86-a1-m1-cA
5 4jjn-a1-m1-cE 96 95 0.7263 0.7188 0.7263 4.63e-45 4jjn-a1-m1-cE_4jjn-a1-m1-cA
6 4jjn-a1-m1-cA 98 95 0.7263 0.7041 0.7263 7.46e-45 4jjn-a1-m1-cE_4jjn-a1-m1-cA
7 7z0o-a1-m1-cC 97 94 0.7158 0.7010 0.7234 3.59e-44 7z0o-a1-m1-cA_7z0o-a1-m1-cC
8 7z0o-a1-m1-cA 94 93 0.7053 0.7128 0.7204 1.66e-43 7z0o-a1-m1-cA_7z0o-a1-m1-cC
9 5ay8-a1-m1-cE 96 94 0.6526 0.6458 0.6596 1.00e-39 5ay8-a1-m1-cE_5ay8-a1-m1-cA
10 5ay8-a1-m1-cA 97 94 0.6526 0.6392 0.6596 1.09e-39 5ay8-a1-m1-cE_5ay8-a1-m1-cA
11 5zbx-a1-m1-cE 101 96 0.6105 0.5743 0.6042 4.55e-35 5zbx-a1-m1-cA_5zbx-a1-m1-cE
12 5zbx-a1-m1-cA 95 94 0.5895 0.5895 0.5957 7.52e-34 5zbx-a1-m1-cA_5zbx-a1-m1-cE
13 6uph-a1-m1-cE 97 94 0.5579 0.5464 0.5638 8.75e-32 6uph-a1-m1-cA_6uph-a1-m1-cE
14 7y7i-a1-m1-cE 97 95 0.5579 0.5464 0.5579 1.09e-31 7y7i-a1-m1-cE_7y7i-a1-m1-cA
15 7y7i-a1-m1-cA 102 95 0.5579 0.5196 0.5579 1.43e-31 7y7i-a1-m1-cE_7y7i-a1-m1-cA
16 6uph-a1-m1-cA 93 91 0.5474 0.5591 0.5714 8.50e-31 6uph-a1-m1-cA_6uph-a1-m1-cE
17 2yfw-a2-m1-cE 88 87 0.5579 0.6023 0.6092 8.57e-30 2yfw-a2-m1-cC_2yfw-a2-m1-cE
18 7d69-a1-m1-cE 99 95 0.5053 0.4848 0.5053 2.06e-26 7d69-a1-m1-cA_7d69-a1-m1-cE
19 7d69-a1-m1-cA 90 87 0.4842 0.5111 0.5287 5.59e-24 7d69-a1-m1-cA_7d69-a1-m1-cE
20 2yfw-a2-m1-cC 71 75 0.4737 0.6338 0.6000 7.93e-24 2yfw-a2-m1-cC_2yfw-a2-m1-cE
21 6xwt-a1-m1-cC 74 68 0.2842 0.3649 0.3971 1.22e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.2842 0.3649 0.3971 1.22e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 82 0.2316 0.2157 0.2683 0.002 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 82 0.2316 0.2157 0.2683 0.002 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 1ku5-a1-m1-cB 66 66 0.2000 0.2879 0.2879 0.12 1ku5-a1-m1-cA_1ku5-a1-m1-cB
26 1ku5-a1-m1-cA 66 66 0.2000 0.2879 0.2879 0.12 1ku5-a1-m1-cA_1ku5-a1-m1-cB
27 2eo0-a2-m1-cA 130 32 0.1474 0.1077 0.4375 5.9 2eo0-a2-m1-cB_2eo0-a2-m1-cA
28 2eo0-a1-m1-cA 130 32 0.1474 0.1077 0.4375 5.9 2eo0-a1-m2-cB_2eo0-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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