Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
RWVQFKEAGQGSRDWRAYSDKKANWKNSDKYFHARGNYDAARRGPGGAWAAKVISDAREA
VQKFTGDSRADQFANEWGRSGKDPNHFRPAGLPKRY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4q5g-a1-m2-cB 96 96 1.0000 1.0000 1.0000 5.78e-66 4q5g-a1-m1-cA_4q5g-a1-m2-cB, 4q5g-a1-m2-cA_4q5g-a1-m2-cB
2 4q5g-a1-m2-cA 96 96 1.0000 1.0000 1.0000 5.78e-66 4q5g-a1-m2-cA_4q5g-a1-m2-cB
3 4q5g-a1-m1-cA 96 96 1.0000 1.0000 1.0000 5.78e-66 4q5g-a1-m1-cA_4q5g-a1-m2-cB
4 6pxz-a1-m1-cA 99 99 1.0000 0.9697 0.9697 9.79e-61 6pxz-a1-m1-cA_6pxz-a1-m1-cC
5 6pxz-a1-m1-cC 103 103 1.0000 0.9320 0.9320 1.65e-58 6pxz-a1-m1-cA_6pxz-a1-m1-cC, 6pxz-a1-m1-cB_6pxz-a1-m1-cC
6 6pxz-a1-m1-cB 103 103 1.0000 0.9320 0.9320 1.65e-58 6pxz-a1-m1-cB_6pxz-a1-m1-cC
7 3i5t-a1-m1-cB 442 51 0.1771 0.0385 0.3333 3.7 3i5t-a1-m1-cB_3i5t-a1-m1-cA
8 3i5t-a1-m1-cA 444 51 0.1771 0.0383 0.3333 3.7 3i5t-a1-m1-cB_3i5t-a1-m1-cA
9 3njd-a2-m3-cB 292 50 0.1875 0.0616 0.3600 7.3 3njd-a2-m2-cA_3njd-a2-m3-cB, 3njd-a2-m3-cA_3njd-a2-m3-cB
10 3n6h-a1-m1-cA 415 26 0.1250 0.0289 0.4615 7.3 3n6h-a1-m1-cC_3n6h-a1-m1-cA
11 3pfr-a2-m1-cC 412 26 0.1250 0.0291 0.4615 7.5 3pfr-a2-m1-cB_3pfr-a2-m1-cC
12 3pfr-a2-m1-cB 412 26 0.1250 0.0291 0.4615 7.5 3pfr-a2-m1-cB_3pfr-a2-m1-cC
13 3n6h-a1-m1-cC 412 26 0.1250 0.0291 0.4615 7.5 3n6h-a1-m1-cC_3n6h-a1-m1-cA, 3n6h-a1-m1-cC_3n6h-a1-m1-cB
14 3n6h-a1-m1-cB 418 26 0.1250 0.0287 0.4615 7.8 3n6h-a1-m1-cC_3n6h-a1-m1-cB
15 3njd-a3-m3-cA 290 50 0.1875 0.0621 0.3600 7.8 3njd-a3-m2-cA_3njd-a3-m3-cA
16 3njd-a3-m2-cA 290 50 0.1875 0.0621 0.3600 7.8 3njd-a3-m2-cA_3njd-a3-m3-cA
17 3njd-a2-m3-cA 290 50 0.1875 0.0621 0.3600 7.8 3njd-a2-m3-cA_3njd-a2-m3-cB
18 3njd-a2-m2-cA 290 50 0.1875 0.0621 0.3600 7.8 3njd-a2-m2-cA_3njd-a2-m3-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600