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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
RWVQFMKEAGQGSRDMWRAYSDMKKANWKNSDKYFHARGNYDAARRGPGGAWAAKVISDA
REAVQKFTGDSRADQFANEWGRSGKDPNHFRPAGLPKRY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pxz-a1-m1-cA 99 99 1.0000 1.0000 1.0000 2.51e-69 6pxz-a1-m1-cA_6pxz-a1-m1-cC
2 6pxz-a1-m1-cC 103 103 1.0000 0.9612 0.9612 4.45e-67 6pxz-a1-m1-cA_6pxz-a1-m1-cC, 6pxz-a1-m1-cB_6pxz-a1-m1-cC
3 6pxz-a1-m1-cB 103 103 1.0000 0.9612 0.9612 4.45e-67 6pxz-a1-m1-cB_6pxz-a1-m1-cC
4 4q5g-a1-m2-cB 96 99 0.9697 1.0000 0.9697 1.01e-60 4q5g-a1-m1-cA_4q5g-a1-m2-cB, 4q5g-a1-m2-cA_4q5g-a1-m2-cB
5 4q5g-a1-m2-cA 96 99 0.9697 1.0000 0.9697 1.01e-60 4q5g-a1-m2-cA_4q5g-a1-m2-cB
6 4q5g-a1-m1-cA 96 99 0.9697 1.0000 0.9697 1.01e-60 4q5g-a1-m1-cA_4q5g-a1-m2-cB
7 3i5t-a1-m1-cB 442 51 0.1717 0.0385 0.3333 3.8 3i5t-a1-m1-cB_3i5t-a1-m1-cA
8 3i5t-a1-m1-cA 444 51 0.1717 0.0383 0.3333 3.8 3i5t-a1-m1-cB_3i5t-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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