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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
SADLALGKQTFEANCAACHAGGNNSVIPDHTLRKAAMEQFLQGGFNLEAITYQVENGKGA
MPAWSGTLDDDEIAAVAAYVYDQASGDKW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1c6o-a1-m1-cB 89 89 1.0000 1.0000 1.0000 5.10e-63 1c6o-a1-m1-cA_1c6o-a1-m1-cB
2 1c6o-a1-m1-cA 89 89 1.0000 1.0000 1.0000 5.10e-63 1c6o-a1-m1-cA_1c6o-a1-m1-cB
3 2v08-a1-m3-cB 84 82 0.5618 0.5952 0.6098 2.86e-27 2v08-a1-m1-cA_2v08-a1-m3-cB, 2v08-a1-m2-cB_2v08-a1-m3-cB, 2v08-a1-m3-cA_2v08-a1-m3-cB
4 2v08-a1-m3-cA 84 82 0.5618 0.5952 0.6098 2.86e-27 2v08-a1-m3-cA_2v08-a1-m3-cB
5 2v08-a1-m2-cB 84 82 0.5618 0.5952 0.6098 2.86e-27 2v08-a1-m2-cB_2v08-a1-m3-cB
6 2v08-a1-m1-cA 84 82 0.5618 0.5952 0.6098 2.86e-27 2v08-a1-m1-cA_2v08-a1-m3-cB
7 2zbo-a7-m1-cK 86 83 0.4719 0.4884 0.5060 1.40e-23 2zbo-a7-m1-cA_2zbo-a7-m1-cK, 2zbo-a7-m1-cC_2zbo-a7-m1-cK, 2zbo-a7-m1-cI_2zbo-a7-m1-cK
8 2zbo-a7-m1-cI 86 83 0.4719 0.4884 0.5060 1.40e-23 2zbo-a7-m1-cI_2zbo-a7-m1-cK
9 2zbo-a7-m1-cE 86 83 0.4719 0.4884 0.5060 1.40e-23 2zbo-a7-m1-cC_2zbo-a7-m1-cE
10 2zbo-a7-m1-cC 86 83 0.4719 0.4884 0.5060 1.40e-23 2zbo-a7-m1-cC_2zbo-a7-m1-cE, 2zbo-a7-m1-cC_2zbo-a7-m1-cK
11 2zbo-a7-m1-cA 86 83 0.4719 0.4884 0.5060 1.40e-23 2zbo-a7-m1-cA_2zbo-a7-m1-cK
12 2dge-a2-m2-cD 100 97 0.3258 0.2900 0.2990 5.57e-05 2dge-a2-m2-cD_2dge-a2-m2-cB
13 2dge-a1-m1-cD 100 97 0.3258 0.2900 0.2990 5.57e-05 2dge-a1-m1-cD_2dge-a1-m1-cA
14 2dge-a2-m2-cB 102 97 0.3258 0.2843 0.2990 6.07e-05 2dge-a2-m1-cA_2dge-a2-m2-cB, 2dge-a2-m2-cD_2dge-a2-m2-cB
15 2dge-a2-m1-cA 102 97 0.3258 0.2843 0.2990 6.07e-05 2dge-a2-m1-cA_2dge-a2-m2-cB
16 2dge-a1-m1-cA 102 97 0.3258 0.2843 0.2990 6.07e-05 2dge-a1-m1-cD_2dge-a1-m1-cA
17 4kmg-a2-m2-cA 88 74 0.2472 0.2500 0.2973 6.00e-04 4kmg-a2-m1-cA_4kmg-a2-m2-cA
18 4kmg-a2-m1-cA 88 74 0.2472 0.2500 0.2973 6.00e-04 4kmg-a2-m1-cA_4kmg-a2-m2-cA
19 4lji-a1-m1-cB 131 87 0.2697 0.1832 0.2759 0.004 4lji-a1-m1-cB_4lji-a1-m1-cA
20 4lji-a1-m1-cA 133 87 0.2697 0.1805 0.2759 0.004 4lji-a1-m1-cB_4lji-a1-m1-cA
21 2zoo-a1-m3-cA 438 100 0.3258 0.0662 0.2900 0.032 2zoo-a1-m2-cA_2zoo-a1-m3-cA
22 2zoo-a1-m2-cA 438 100 0.3258 0.0662 0.2900 0.032 2zoo-a1-m2-cA_2zoo-a1-m3-cA
23 1f1c-a1-m1-cB 129 54 0.1910 0.1318 0.3148 0.048 1f1c-a1-m1-cA_1f1c-a1-m1-cB
24 1f1c-a1-m1-cA 129 54 0.1910 0.1318 0.3148 0.048 1f1c-a1-m1-cA_1f1c-a1-m1-cB
25 6k7c-a1-m1-cC 76 56 0.2135 0.2500 0.3393 0.66 6k7c-a1-m1-cA_6k7c-a1-m1-cC
26 6k7c-a1-m1-cA 76 56 0.2135 0.2500 0.3393 0.66 6k7c-a1-m1-cA_6k7c-a1-m1-cC
27 1zzh-a3-m1-cC 307 53 0.2135 0.0619 0.3585 6.0 1zzh-a3-m1-cD_1zzh-a3-m1-cC
28 4rsz-a7-m3-cF 104 31 0.1236 0.1058 0.3548 7.4 4rsz-a7-m3-cD_4rsz-a7-m3-cF
29 4rsz-a7-m3-cD 104 31 0.1236 0.1058 0.3548 7.4 4rsz-a7-m1-cA_4rsz-a7-m3-cD, 4rsz-a7-m3-cD_4rsz-a7-m3-cF
30 4rsz-a7-m1-cA 104 31 0.1236 0.1058 0.3548 7.4 4rsz-a7-m1-cA_4rsz-a7-m3-cD
31 3wc8-a1-m2-cA 104 31 0.1236 0.1058 0.3548 7.4 3wc8-a1-m1-cA_3wc8-a1-m2-cA
32 3wc8-a1-m1-cA 104 31 0.1236 0.1058 0.3548 7.4 3wc8-a1-m1-cA_3wc8-a1-m2-cA
33 3nbt-a1-m1-cF 104 31 0.1236 0.1058 0.3548 7.4 3nbt-a1-m1-cE_3nbt-a1-m1-cF
34 3nbt-a1-m1-cE 104 31 0.1236 0.1058 0.3548 7.4 3nbt-a1-m1-cE_3nbt-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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