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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
SAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKK
IIEKMLNSDKSN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rod-a1-m1-cB 72 72 1.0000 1.0000 1.0000 2.43e-48 1rod-a1-m1-cA_1rod-a1-m1-cB
2 1rod-a1-m1-cA 72 72 1.0000 1.0000 1.0000 2.43e-48 1rod-a1-m1-cA_1rod-a1-m1-cB
3 1qe6-a3-m1-cD 72 66 0.7639 0.7639 0.8333 7.69e-36 1qe6-a3-m2-cB_1qe6-a3-m1-cD
4 1qe6-a3-m2-cB 71 65 0.7500 0.7606 0.8308 3.56e-35 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
5 1qe6-a3-m2-cA 68 61 0.7083 0.7500 0.8361 2.70e-33 1qe6-a3-m2-cA_1qe6-a3-m2-cB
6 1msh-a1-m1-cB 72 70 0.6250 0.6250 0.6429 4.54e-27 1msh-a1-m1-cA_1msh-a1-m1-cB
7 1msh-a1-m1-cA 72 70 0.6250 0.6250 0.6429 4.54e-27 1msh-a1-m1-cA_1msh-a1-m1-cB
8 6wzj-a1-m1-cE 63 64 0.5139 0.5873 0.5781 2.66e-21 6wzj-a1-m1-cF_6wzj-a1-m1-cE
9 1mi2-a1-m1-cB 73 71 0.5139 0.5068 0.5211 1.10e-20 1mi2-a1-m1-cA_1mi2-a1-m1-cB
10 1mi2-a1-m1-cA 73 71 0.5139 0.5068 0.5211 1.10e-20 1mi2-a1-m1-cA_1mi2-a1-m1-cB
11 1pfn-a1-m1-cD 68 68 0.5000 0.5294 0.5294 1.43e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cD
12 1pfn-a1-m1-cC 68 68 0.5000 0.5294 0.5294 1.43e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC
13 1pfn-a1-m1-cB 68 68 0.5000 0.5294 0.5294 1.43e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
14 6wzk-a1-m1-cF 64 64 0.5000 0.5625 0.5625 1.61e-20 6wzk-a1-m1-cE_6wzk-a1-m1-cF
15 6wzk-a1-m1-cE 64 64 0.5000 0.5625 0.5625 1.61e-20 6wzk-a1-m1-cE_6wzk-a1-m1-cF
16 3n52-a3-m1-cB 71 70 0.5000 0.5070 0.5143 1.05e-19 3n52-a3-m1-cD_3n52-a3-m1-cB
17 1tvx-a1-m1-cD 71 66 0.5000 0.5070 0.5455 2.70e-19 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
18 1tvx-a1-m1-cB 71 66 0.5000 0.5070 0.5455 2.70e-19 1tvx-a1-m1-cB_1tvx-a1-m1-cD
19 3n52-a3-m1-cD 70 66 0.4861 0.5000 0.5303 5.55e-19 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
20 3n52-a3-m1-cC 67 67 0.4861 0.5224 0.5224 7.31e-19 3n52-a3-m1-cC_3n52-a3-m1-cD
21 1tvx-a1-m1-cC 64 65 0.4861 0.5469 0.5385 1.41e-18 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
22 1tvx-a1-m1-cA 64 65 0.4861 0.5469 0.5385 1.41e-18 1tvx-a1-m1-cA_1tvx-a1-m1-cC
23 6wzj-a1-m1-cF 59 63 0.4722 0.5763 0.5397 3.42e-18 6wzj-a1-m1-cF_6wzj-a1-m1-cE
24 2mgs-a1-m1-cB 71 66 0.4028 0.4085 0.4394 4.52e-18 2mgs-a1-m1-cA_2mgs-a1-m1-cB
25 2mgs-a1-m1-cA 71 66 0.4028 0.4085 0.4394 4.52e-18 2mgs-a1-m1-cA_2mgs-a1-m1-cB
26 4r9y-a1-m1-cD 65 65 0.4167 0.4615 0.4615 2.79e-16 4r9y-a1-m1-cB_4r9y-a1-m1-cD
27 4r9y-a1-m1-cB 65 65 0.4167 0.4615 0.4615 2.79e-16 4r9y-a1-m1-cB_4r9y-a1-m1-cD
28 4r9w-a1-m2-cB 64 65 0.4167 0.4688 0.4615 2.81e-16 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
29 1f9q-a1-m1-cC 62 63 0.4028 0.4677 0.4603 2.03e-15 1f9q-a1-m1-cB_1f9q-a1-m1-cC
30 1f9q-a1-m1-cB 62 63 0.4028 0.4677 0.4603 2.03e-15 1f9q-a1-m1-cB_1f9q-a1-m1-cC
31 4r9w-a1-m2-cA 62 62 0.4028 0.4677 0.4677 2.12e-15 4r9w-a1-m2-cA_4r9w-a1-m2-cB
32 4r9w-a1-m1-cA 62 62 0.4028 0.4677 0.4677 2.12e-15 4r9w-a1-m1-cA_4r9w-a1-m2-cB
33 4hsv-a1-m1-cD 65 65 0.3889 0.4308 0.4308 1.46e-13 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
34 4hsv-a1-m1-cA 65 65 0.3889 0.4308 0.4308 1.46e-13 4hsv-a1-m1-cA_4hsv-a1-m1-cD
35 1plf-a1-m1-cD 65 66 0.3889 0.4308 0.4242 2.29e-13 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
36 1plf-a1-m1-cB 65 66 0.3889 0.4308 0.4242 2.29e-13 1plf-a1-m1-cB_1plf-a1-m1-cD
37 1plf-a1-m1-cC 63 64 0.3889 0.4444 0.4375 4.26e-13 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
38 1plf-a1-m1-cA 63 64 0.3889 0.4444 0.4375 4.26e-13 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
39 4hsv-a1-m1-cC 59 59 0.3472 0.4237 0.4237 1.02e-11 4hsv-a1-m1-cC_4hsv-a1-m1-cD
40 1o7y-a1-m1-cA 67 65 0.2500 0.2687 0.2769 2.12e-06 1o7y-a1-m1-cC_1o7y-a1-m1-cA
41 1o7y-a1-m1-cC 63 62 0.2500 0.2857 0.2903 4.50e-06 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
42 1o7y-a1-m1-cD 62 61 0.2500 0.2903 0.2951 6.59e-06 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 1o7y-a1-m1-cB 62 58 0.2361 0.2742 0.2931 4.81e-05 1o7y-a1-m1-cB_1o7y-a1-m1-cC
44 2r3z-a1-m1-cD 64 63 0.2500 0.2812 0.2857 3.69e-04 2r3z-a1-m1-cD_2r3z-a1-m1-cA
45 2r3z-a1-m1-cA 68 63 0.2500 0.2647 0.2857 5.23e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
46 2r3z-a1-m1-cB 67 63 0.2500 0.2687 0.2857 5.24e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA
47 4mhe-a2-m1-cB 69 65 0.2778 0.2899 0.3077 0.007 4mhe-a2-m1-cC_4mhe-a2-m1-cB
48 3hp3-a3-m1-cD 64 47 0.2083 0.2344 0.3191 0.008 3hp3-a3-m1-cD_3hp3-a3-m1-cF
49 3hp3-a3-m1-cF 65 47 0.2083 0.2308 0.3191 0.009 3hp3-a3-m1-cD_3hp3-a3-m1-cF
50 4mhe-a2-m1-cC 61 63 0.2778 0.3279 0.3175 0.009 4mhe-a2-m1-cC_4mhe-a2-m1-cB
51 4uai-a1-m1-cA 68 47 0.2083 0.2206 0.3191 0.010 4uai-a1-m1-cB_4uai-a1-m1-cA
52 4uai-a1-m1-cB 67 47 0.2083 0.2239 0.3191 0.011 4uai-a1-m1-cB_4uai-a1-m1-cA
53 7lht-a1-m1-cB 1795 45 0.1667 0.0067 0.2667 1.2 7lht-a1-m1-cA_7lht-a1-m1-cB
54 7lht-a1-m1-cA 1795 45 0.1667 0.0067 0.2667 1.2 7lht-a1-m1-cA_7lht-a1-m1-cB
55 6vp8-a1-m1-cA 1083 45 0.1667 0.0111 0.2667 1.3 6vp8-a1-m1-cC_6vp8-a1-m1-cA
56 1exz-a3-m1-cC 131 53 0.2500 0.1374 0.3396 2.2 1exz-a3-m1-cC_1exz-a3-m1-cB, 1exz-a3-m1-cD_1exz-a3-m1-cC
57 1exz-a3-m1-cD 124 53 0.2500 0.1452 0.3396 2.3 1exz-a3-m1-cD_1exz-a3-m1-cB, 1exz-a3-m1-cD_1exz-a3-m1-cC
58 1exz-a3-m1-cB 140 53 0.2500 0.1286 0.3396 2.4 1exz-a3-m1-cC_1exz-a3-m1-cB, 1exz-a3-m1-cD_1exz-a3-m1-cB
59 2fj2-a2-m1-cC 68 32 0.1250 0.1324 0.2812 3.0 2fj2-a2-m1-cD_2fj2-a2-m1-cC
60 2fj2-a2-m1-cD 67 32 0.1250 0.1343 0.2812 3.0 2fj2-a2-m1-cD_2fj2-a2-m1-cC
61 1ncv-a1-m1-cB 76 36 0.1250 0.1184 0.2500 3.5 1ncv-a1-m1-cA_1ncv-a1-m1-cB
62 1ncv-a1-m1-cA 76 36 0.1250 0.1184 0.2500 3.5 1ncv-a1-m1-cA_1ncv-a1-m1-cB
63 3hq1-a1-m1-cA 573 42 0.2222 0.0279 0.3810 4.0 3hq1-a1-m1-cA_3hq1-a1-m1-cB
64 3hq1-a1-m1-cB 576 42 0.2222 0.0278 0.3810 4.0 3hq1-a1-m1-cA_3hq1-a1-m1-cB
65 2vxw-a1-m1-cD 62 57 0.1667 0.1935 0.2105 4.6 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
66 1nr4-a5-m3-cF 66 43 0.1389 0.1515 0.2326 5.3 1nr4-a5-m3-cF_1nr4-a5-m3-cE
67 6aez-a1-m3-cA 64 57 0.1944 0.2188 0.2456 5.5 6aez-a1-m2-cA_6aez-a1-m3-cA
68 6aez-a1-m2-cA 64 57 0.1944 0.2188 0.2456 5.5 6aez-a1-m2-cA_6aez-a1-m3-cA
69 1ym5-a1-m2-cA 294 48 0.2083 0.0510 0.3125 5.5 1ym5-a1-m1-cA_1ym5-a1-m2-cA
70 1ym5-a1-m1-cA 294 48 0.2083 0.0510 0.3125 5.5 1ym5-a1-m1-cA_1ym5-a1-m2-cA
71 2vxw-a1-m1-cB 69 57 0.1944 0.2029 0.2456 5.7 2vxw-a1-m1-cD_2vxw-a1-m1-cB
72 2vxw-a1-m1-cA 69 57 0.1944 0.2029 0.2456 5.7 2vxw-a1-m1-cD_2vxw-a1-m1-cA
73 5l2u-a2-m2-cI 65 57 0.1667 0.1846 0.2105 5.7 5l2u-a2-m2-cG_5l2u-a2-m2-cI
74 5dnf-a1-m1-cG 65 57 0.1667 0.1846 0.2105 5.7 5dnf-a1-m1-cE_5dnf-a1-m1-cG
75 5dnf-a1-m1-cE 65 57 0.1667 0.1846 0.2105 5.7 5dnf-a1-m1-cE_5dnf-a1-m1-cG
76 5dnf-a1-m1-cD 65 57 0.1667 0.1846 0.2105 5.7 5dnf-a1-m1-cA_5dnf-a1-m1-cD
77 5dnf-a1-m1-cA 65 57 0.1667 0.1846 0.2105 5.7 5dnf-a1-m1-cA_5dnf-a1-m1-cD
78 1nr4-a5-m3-cE 69 43 0.1389 0.1449 0.2326 6.1 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
79 5l2u-a2-m2-cH 64 57 0.1667 0.1875 0.2105 6.1 5l2u-a2-m2-cG_5l2u-a2-m2-cH
80 5l2u-a2-m2-cG 64 57 0.1667 0.1875 0.2105 6.1 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
81 2l9h-a1-m1-cC 67 57 0.1944 0.2090 0.2456 6.4 2l9h-a1-m1-cA_2l9h-a1-m1-cC
82 2l9h-a1-m1-cA 67 57 0.1944 0.2090 0.2456 6.4 2l9h-a1-m1-cA_2l9h-a1-m1-cC
83 1hrj-a1-m1-cB 68 57 0.1944 0.2059 0.2456 6.5 1hrj-a1-m1-cA_1hrj-a1-m1-cB
84 1hrj-a1-m1-cA 68 57 0.1944 0.2059 0.2456 6.5 1hrj-a1-m1-cA_1hrj-a1-m1-cB
85 6log-a1-m2-cA 63 57 0.1944 0.2222 0.2456 6.5 6log-a1-m1-cA_6log-a1-m2-cA
86 6log-a1-m1-cA 63 57 0.1944 0.2222 0.2456 6.5 6log-a1-m1-cA_6log-a1-m2-cA
87 2xz7-a1-m2-cA 324 24 0.0972 0.0216 0.2917 8.0 2xz7-a1-m1-cA_2xz7-a1-m2-cA
88 2xz7-a1-m1-cA 324 24 0.0972 0.0216 0.2917 8.0 2xz7-a1-m1-cA_2xz7-a1-m2-cA
89 5a52-a1-m2-cA 154 37 0.2083 0.0974 0.4054 9.4 5a52-a1-m1-cA_5a52-a1-m2-cA
90 5a52-a1-m1-cA 154 37 0.2083 0.0974 0.4054 9.4 5a52-a1-m1-cA_5a52-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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