Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
SAKQAQQQITSLETQLYEVNETMFGLERERDFYFNKLREIEILVQTHLTTSPMSMENMLE
RIQAILYSTE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5m9e-a2-m1-cD 70 70 1.0000 1.0000 1.0000 2.95e-46 5m9e-a2-m1-cC_5m9e-a2-m1-cD
2 5m9e-a2-m1-cC 68 68 0.9714 1.0000 1.0000 6.26e-45 5m9e-a2-m1-cC_5m9e-a2-m1-cD
3 4e61-a1-m1-cB 84 69 0.3714 0.3095 0.3768 2.89e-09 4e61-a1-m1-cB_4e61-a1-m1-cA
4 5jvm-a1-m1-cA 82 68 0.3714 0.3171 0.3824 1.87e-08 5jvm-a1-m1-cB_5jvm-a1-m1-cA
5 5jvm-a1-m1-cB 79 68 0.3714 0.3291 0.3824 2.16e-08 5jvm-a1-m1-cB_5jvm-a1-m1-cA
6 4e61-a1-m1-cA 91 71 0.3714 0.2857 0.3662 3.74e-08 4e61-a1-m1-cB_4e61-a1-m1-cA
7 6pf2-a1-m1-cA 157 69 0.3571 0.1592 0.3623 1.14e-06 6pf2-a1-m1-cB_6pf2-a1-m1-cA
8 4xa1-a1-m1-cB 155 65 0.3286 0.1484 0.3538 1.26e-06 4xa1-a1-m1-cA_4xa1-a1-m1-cB
9 6pf2-a1-m1-cB 150 69 0.3571 0.1667 0.3623 1.38e-06 6pf2-a1-m1-cB_6pf2-a1-m1-cA
10 5jvu-a1-m1-cA 76 45 0.3000 0.2763 0.4667 1.76e-06 5jvu-a1-m1-cB_5jvu-a1-m1-cA
11 4xa1-a1-m1-cA 153 64 0.3286 0.1503 0.3594 1.96e-06 4xa1-a1-m1-cA_4xa1-a1-m1-cB
12 5jvp-a2-m3-cB 88 45 0.3000 0.2386 0.4667 2.29e-06 5jvp-a2-m1-cB_5jvp-a2-m3-cB
13 5jvp-a2-m1-cB 88 45 0.3000 0.2386 0.4667 2.29e-06 5jvp-a2-m1-cB_5jvp-a2-m3-cB
14 5jv3-a2-m1-cD 68 47 0.3000 0.3088 0.4468 2.48e-06 5jv3-a2-m1-cC_5jv3-a2-m1-cD
15 5jvu-a1-m1-cB 69 44 0.3000 0.3043 0.4773 2.83e-06 5jvu-a1-m1-cB_5jvu-a1-m1-cA
16 6pfp-a2-m1-cD 156 82 0.4000 0.1795 0.3415 7.10e-06 6pfp-a2-m1-cC_6pfp-a2-m1-cD
17 6pfp-a2-m1-cC 156 82 0.4000 0.1795 0.3415 7.10e-06 6pfp-a2-m1-cC_6pfp-a2-m1-cD
18 5jv3-a2-m1-cC 64 45 0.2857 0.3125 0.4444 2.78e-05 5jv3-a2-m1-cC_5jv3-a2-m1-cD
19 3mtu-a2-m1-cA 72 44 0.2571 0.2500 0.4091 6.01e-05 3mtu-a2-m1-cB_3mtu-a2-m1-cA
20 3mtu-a2-m1-cB 65 44 0.2571 0.2769 0.4091 6.48e-05 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
21 3mtu-a2-m1-cD 64 44 0.2571 0.2812 0.4091 9.29e-05 3mtu-a2-m1-cD_3mtu-a2-m1-cB
22 5jx1-a1-m2-cA 64 41 0.2571 0.2812 0.4390 1.84e-04 5jx1-a1-m1-cA_5jx1-a1-m2-cA
23 5jx1-a1-m1-cA 64 41 0.2571 0.2812 0.4390 1.84e-04 5jx1-a1-m1-cA_5jx1-a1-m2-cA
24 4xa3-a1-m1-cA 142 65 0.2857 0.1408 0.3077 5.66e-04 4xa3-a1-m1-cA_4xa3-a1-m1-cB
25 6yf5-a2-m1-cC 87 40 0.2429 0.1954 0.4250 0.003 6yf5-a2-m1-cD_6yf5-a2-m1-cC
26 6yf5-a2-m1-cD 82 40 0.2429 0.2073 0.4250 0.003 6yf5-a2-m1-cD_6yf5-a2-m1-cC
27 4xa3-a1-m1-cB 142 64 0.2714 0.1338 0.2969 0.006 4xa3-a1-m1-cA_4xa3-a1-m1-cB
28 2cse-a1-m9-c1 1264 41 0.2000 0.0111 0.3415 2.0 2cse-a1-m7-c1_2cse-a1-m9-c1, 2cse-a1-m8-c1_2cse-a1-m9-c1
29 2cse-a1-m8-c1 1264 41 0.2000 0.0111 0.3415 2.0 2cse-a1-m8-c1_2cse-a1-m9-c1
30 2cse-a1-m7-c1 1264 41 0.2000 0.0111 0.3415 2.0 2cse-a1-m7-c1_2cse-a1-m9-c1
31 2jbr-a1-m1-cD 399 24 0.1857 0.0326 0.5417 4.0 2jbr-a1-m1-cA_2jbr-a1-m1-cD, 2jbr-a1-m1-cC_2jbr-a1-m1-cD
32 2jbr-a1-m1-cC 399 24 0.1857 0.0326 0.5417 4.0 2jbr-a1-m1-cC_2jbr-a1-m1-cD
33 2jbr-a1-m1-cA 399 24 0.1857 0.0326 0.5417 4.0 2jbr-a1-m1-cA_2jbr-a1-m1-cD
34 3fd0-a1-m2-cB 399 40 0.2000 0.0351 0.3500 4.9 3fd0-a1-m1-cA_3fd0-a1-m2-cB, 3fd0-a1-m1-cB_3fd0-a1-m2-cB, 3fd0-a1-m2-cA_3fd0-a1-m2-cB
35 3fd0-a1-m2-cA 399 40 0.2000 0.0351 0.3500 4.9 3fd0-a1-m2-cA_3fd0-a1-m2-cB
36 3fd0-a1-m1-cB 399 40 0.2000 0.0351 0.3500 4.9 3fd0-a1-m1-cB_3fd0-a1-m2-cB
37 3fd0-a1-m1-cA 399 40 0.2000 0.0351 0.3500 4.9 3fd0-a1-m1-cA_3fd0-a1-m2-cB
38 6pfz-a2-m1-cB 541 28 0.1571 0.0203 0.3929 5.0 6pfz-a2-m1-cA_6pfz-a2-m1-cB
39 6pfz-a2-m1-cA 541 28 0.1571 0.0203 0.3929 5.0 6pfz-a2-m1-cA_6pfz-a2-m1-cB
40 4cjn-a1-m1-cB 642 59 0.2571 0.0280 0.3051 5.8 4cjn-a1-m1-cA_4cjn-a1-m1-cB
41 4cjn-a1-m1-cA 642 59 0.2571 0.0280 0.3051 5.8 4cjn-a1-m1-cA_4cjn-a1-m1-cB
42 7jl2-a1-m1-cE 662 52 0.2286 0.0242 0.3077 6.4 7jl2-a1-m1-cA_7jl2-a1-m1-cE
43 7jl2-a1-m1-cA 662 52 0.2286 0.0242 0.3077 6.4 7jl2-a1-m1-cA_7jl2-a1-m1-cE

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600