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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
SASKEEIAALIVNYFSSIVEKKEISEDGADSLNVAMDCISEAFGFEREAV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zdm-a1-m1-cE 50 50 1.0000 1.0000 1.0000 3.27e-29 3zdm-a1-m1-cE_3zdm-a1-m1-cA, 3zdm-a1-m1-cE_3zdm-a1-m1-cD
2 3zdm-a1-m1-cD 69 50 1.0000 0.7246 1.0000 3.68e-29 3zdm-a1-m1-cA_3zdm-a1-m1-cD, 3zdm-a1-m1-cE_3zdm-a1-m1-cD
3 3zdm-a1-m1-cA 69 50 1.0000 0.7246 1.0000 3.68e-29 3zdm-a1-m1-cA_3zdm-a1-m1-cD, 3zdm-a1-m1-cE_3zdm-a1-m1-cA
4 2lxc-a1-m1-cC 74 50 1.0000 0.6757 1.0000 3.82e-29 2lxc-a1-m1-cB_2lxc-a1-m1-cC
5 2lxc-a1-m1-cB 74 50 1.0000 0.6757 1.0000 3.82e-29 2lxc-a1-m1-cB_2lxc-a1-m1-cC
6 4gof-a1-m1-cB 52 41 0.2600 0.2500 0.3171 0.008 4gof-a1-m1-cA_4gof-a1-m1-cB
7 4gof-a1-m1-cA 52 41 0.2600 0.2500 0.3171 0.008 4gof-a1-m1-cA_4gof-a1-m1-cB
8 4cpg-a1-m1-cB 69 42 0.2600 0.1884 0.3095 0.010 4cpg-a1-m1-cA_4cpg-a1-m1-cB
9 4cpg-a1-m1-cA 69 42 0.2600 0.1884 0.3095 0.010 4cpg-a1-m1-cA_4cpg-a1-m1-cB
10 7esd-a1-m9-cC 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m10-cA_7esd-a1-m9-cC, 7esd-a1-m24-cB_7esd-a1-m9-cC, 7esd-a1-m54-cC_7esd-a1-m9-cC, 7esd-a1-m9-cA_7esd-a1-m9-cC, 7esd-a1-m9-cB_7esd-a1-m9-cC
11 7esd-a1-m9-cB 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m9-cA_7esd-a1-m9-cB, 7esd-a1-m9-cB_7esd-a1-m9-cC
12 7esd-a1-m9-cA 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m8-cA_7esd-a1-m9-cA, 7esd-a1-m9-cA_7esd-a1-m9-cB, 7esd-a1-m9-cA_7esd-a1-m9-cC
13 7esd-a1-m8-cA 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m8-cA_7esd-a1-m9-cA
14 7esd-a1-m54-cC 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m54-cC_7esd-a1-m9-cC
15 7esd-a1-m24-cB 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m24-cB_7esd-a1-m9-cC
16 7esd-a1-m10-cA 499 48 0.3200 0.0321 0.3333 8.5 7esd-a1-m10-cA_7esd-a1-m9-cC

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Reference:
Jacob Schwartz et al.

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