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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
SAYDSGKTIADVQKSATQRIRISHRWYRGRRYVDVRLVVVDRDGDFVPTRQGISIRPELL
AQVIQGLLLASREG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5a4o-a1-m1-cB 74 74 1.0000 1.0000 1.0000 2.89e-48 5a4o-a1-m1-cA_5a4o-a1-m1-cB
2 5a4o-a1-m1-cA 74 74 1.0000 1.0000 1.0000 2.89e-48 5a4o-a1-m1-cA_5a4o-a1-m1-cB
3 4bg7-a1-m1-cB 88 38 0.1351 0.1136 0.2632 0.062 4bg7-a1-m1-cB_4bg7-a1-m1-cA
4 4bg7-a1-m1-cA 98 38 0.1351 0.1020 0.2632 0.077 4bg7-a1-m1-cB_4bg7-a1-m1-cA
5 3lqy-a2-m2-cA 182 71 0.2432 0.0989 0.2535 5.4 3lqy-a2-m1-cA_3lqy-a2-m2-cA
6 3lqy-a2-m1-cA 182 71 0.2432 0.0989 0.2535 5.4 3lqy-a2-m1-cA_3lqy-a2-m2-cA
7 3bkw-a1-m1-cA 215 27 0.1486 0.0512 0.4074 6.3 3bkw-a1-m1-cB_3bkw-a1-m1-cA
8 3bkw-a1-m1-cB 212 27 0.1486 0.0519 0.4074 6.8 3bkw-a1-m1-cB_3bkw-a1-m1-cA
9 7t3k-a1-m1-cK 228 49 0.2568 0.0833 0.3878 6.8 7t3k-a1-m1-cJ_7t3k-a1-m1-cK
10 7t3k-a1-m1-cJ 228 49 0.2568 0.0833 0.3878 6.8 7t3k-a1-m1-cJ_7t3k-a1-m1-cK
11 3f81-a2-m3-cB 179 58 0.2297 0.0950 0.2931 7.0 3f81-a2-m1-cB_3f81-a2-m3-cB
12 3f81-a2-m1-cB 179 58 0.2297 0.0950 0.2931 7.0 3f81-a2-m1-cB_3f81-a2-m3-cB

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Reference:
Jacob Schwartz et al.

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