Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
SDAIKKKQLKLDKENALDRAEQAEADKDFYFGKLRNIELICQENEGENDPVLQRIVDILY
ATDE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3mtu-a2-m1-cD 64 64 1.0000 1.0000 1.0000 5.33e-41 3mtu-a2-m1-cD_3mtu-a2-m1-cB
2 3mtu-a2-m1-cA 72 64 1.0000 0.8889 1.0000 8.84e-41 3mtu-a2-m1-cB_3mtu-a2-m1-cA
3 3mtu-a2-m1-cB 65 63 0.9844 0.9692 1.0000 2.61e-40 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
4 4xa1-a1-m1-cB 155 59 0.6719 0.2774 0.7288 1.47e-25 4xa1-a1-m1-cA_4xa1-a1-m1-cB
5 4xa1-a1-m1-cA 153 57 0.6406 0.2680 0.7193 3.16e-24 4xa1-a1-m1-cA_4xa1-a1-m1-cB
6 5jvp-a2-m3-cB 88 64 0.7344 0.5341 0.7344 5.51e-24 5jvp-a2-m1-cB_5jvp-a2-m3-cB
7 5jvp-a2-m1-cB 88 64 0.7344 0.5341 0.7344 5.51e-24 5jvp-a2-m1-cB_5jvp-a2-m3-cB
8 5jvm-a1-m1-cB 79 61 0.6719 0.5443 0.7049 9.84e-24 5jvm-a1-m1-cB_5jvm-a1-m1-cA
9 5jvm-a1-m1-cA 82 61 0.6719 0.5244 0.7049 1.20e-23 5jvm-a1-m1-cB_5jvm-a1-m1-cA
10 5jvu-a1-m1-cA 76 46 0.6094 0.5132 0.8478 1.62e-23 5jvu-a1-m1-cB_5jvu-a1-m1-cA
11 6pf2-a1-m1-cB 150 46 0.6094 0.2600 0.8478 3.57e-23 6pf2-a1-m1-cB_6pf2-a1-m1-cA
12 6pf2-a1-m1-cA 157 46 0.6094 0.2484 0.8478 5.05e-23 6pf2-a1-m1-cB_6pf2-a1-m1-cA
13 6yf5-a2-m1-cC 87 56 0.6562 0.4828 0.7500 9.27e-23 6yf5-a2-m1-cD_6yf5-a2-m1-cC
14 6yf5-a2-m1-cD 82 56 0.6562 0.5122 0.7500 9.87e-23 6yf5-a2-m1-cD_6yf5-a2-m1-cC
15 6pfp-a2-m1-cD 156 44 0.5938 0.2436 0.8636 1.63e-22 6pfp-a2-m1-cC_6pfp-a2-m1-cD
16 6pfp-a2-m1-cC 156 44 0.5938 0.2436 0.8636 1.63e-22 6pfp-a2-m1-cC_6pfp-a2-m1-cD
17 5jvu-a1-m1-cB 69 44 0.5781 0.5362 0.8409 2.03e-22 5jvu-a1-m1-cB_5jvu-a1-m1-cA
18 5jv3-a2-m1-cD 68 39 0.5625 0.5294 0.9231 4.35e-22 5jv3-a2-m1-cC_5jv3-a2-m1-cD
19 5jv3-a2-m1-cC 64 37 0.5312 0.5312 0.9189 2.16e-20 5jv3-a2-m1-cC_5jv3-a2-m1-cD
20 4xa6-a2-m1-cC 100 37 0.5312 0.3400 0.9189 5.48e-19 4xa6-a2-m1-cD_4xa6-a2-m1-cC
21 4xa6-a2-m1-cD 93 36 0.5156 0.3548 0.9167 4.59e-18 4xa6-a2-m1-cD_4xa6-a2-m1-cC
22 4xa6-a1-m1-cA 149 36 0.5156 0.2215 0.9167 1.04e-17 4xa6-a1-m1-cB_4xa6-a1-m1-cA
23 5jx1-a1-m2-cA 64 38 0.4844 0.4844 0.8158 8.80e-15 5jx1-a1-m1-cA_5jx1-a1-m2-cA
24 5jx1-a1-m1-cA 64 38 0.4844 0.4844 0.8158 8.80e-15 5jx1-a1-m1-cA_5jx1-a1-m2-cA
25 4xa6-a1-m1-cB 146 35 0.4844 0.2123 0.8857 1.05e-14 4xa6-a1-m1-cB_4xa6-a1-m1-cA
26 4xa3-a1-m1-cA 142 33 0.4531 0.2042 0.8788 5.09e-14 4xa3-a1-m1-cA_4xa3-a1-m1-cB
27 4xa3-a1-m1-cB 142 32 0.4375 0.1972 0.8750 6.32e-13 4xa3-a1-m1-cA_4xa3-a1-m1-cB
28 3u1a-a3-m2-cD 80 28 0.3906 0.3125 0.8929 3.91e-07 3u1a-a3-m2-cD_3u1a-a3-m1-cA, 3u1a-a3-m2-cD_3u1a-a3-m1-cB, 3u1a-a3-m2-cD_3u1a-a3-m2-cC
29 3u1a-a3-m1-cA 82 28 0.3906 0.3049 0.8929 4.36e-07 3u1a-a3-m1-cA_3u1a-a3-m2-cC, 3u1a-a3-m2-cD_3u1a-a3-m1-cA
30 3u1c-a2-m3-cB 101 28 0.3906 0.2475 0.8929 4.53e-07 3u1c-a2-m1-cB_3u1c-a2-m3-cB
31 3u1c-a2-m1-cB 101 28 0.3906 0.2475 0.8929 4.53e-07 3u1c-a2-m1-cB_3u1c-a2-m3-cB
32 3u1a-a3-m2-cC 84 28 0.3906 0.2976 0.8929 4.54e-07 3u1a-a3-m1-cA_3u1a-a3-m2-cC, 3u1a-a3-m1-cB_3u1a-a3-m2-cC, 3u1a-a3-m2-cD_3u1a-a3-m2-cC
33 3u1a-a3-m1-cB 84 28 0.3906 0.2976 0.8929 4.54e-07 3u1a-a3-m1-cB_3u1a-a3-m2-cC, 3u1a-a3-m2-cD_3u1a-a3-m1-cB
34 5kht-a2-m1-cD 47 27 0.3750 0.5106 0.8889 8.10e-07 5kht-a2-m1-cB_5kht-a2-m1-cD
35 5kht-a2-m1-cB 47 27 0.3750 0.5106 0.8889 8.10e-07 5kht-a2-m1-cB_5kht-a2-m1-cD
36 3u59-a2-m2-cC 101 39 0.3750 0.2376 0.6154 7.26e-06 3u59-a2-m1-cC_3u59-a2-m2-cC
37 3u59-a2-m1-cC 101 39 0.3750 0.2376 0.6154 7.26e-06 3u59-a2-m1-cC_3u59-a2-m2-cC
38 5m9e-a2-m1-cD 70 44 0.2812 0.2571 0.4091 8.49e-05 5m9e-a2-m1-cC_5m9e-a2-m1-cD
39 2z5i-a6-m2-cJ 36 25 0.3281 0.5833 0.8400 1.21e-04 2z5i-a6-m2-cI_2z5i-a6-m2-cJ
40 2z5i-a6-m2-cI 36 25 0.3281 0.5833 0.8400 1.21e-04 2z5i-a6-m2-cI_2z5i-a6-m2-cJ
41 5m9e-a2-m1-cC 68 43 0.2812 0.2647 0.4186 1.47e-04 5m9e-a2-m1-cC_5m9e-a2-m1-cD
42 4e61-a1-m1-cA 91 50 0.3281 0.2308 0.4200 8.19e-04 4e61-a1-m1-cB_4e61-a1-m1-cA
43 4e61-a1-m1-cB 84 46 0.2812 0.2143 0.3913 0.012 4e61-a1-m1-cB_4e61-a1-m1-cA
44 3dn7-a1-m1-cA 143 58 0.2812 0.1259 0.3103 0.34 3dn7-a1-m1-cA_3dn7-a1-m1-cB
45 3dn7-a1-m1-cB 145 58 0.2812 0.1241 0.3103 0.34 3dn7-a1-m1-cA_3dn7-a1-m1-cB
46 6n2g-a1-m1-cA 285 40 0.1875 0.0421 0.3000 0.64 6n2g-a1-m2-cD_6n2g-a1-m1-cA
47 6n2g-a1-m2-cD 273 40 0.1875 0.0440 0.3000 0.67 6n2g-a1-m2-cD_6n2g-a1-m1-cA
48 2l01-a1-m1-cB 77 50 0.2500 0.2078 0.3200 2.4 2l01-a1-m1-cA_2l01-a1-m1-cB
49 2l01-a1-m1-cA 77 50 0.2500 0.2078 0.3200 2.4 2l01-a1-m1-cA_2l01-a1-m1-cB
50 4ywv-a1-m1-cB 455 45 0.2188 0.0308 0.3111 6.3 4ywv-a1-m1-cA_4ywv-a1-m1-cB
51 4ywv-a1-m1-cA 455 45 0.2188 0.0308 0.3111 6.3 4ywv-a1-m1-cA_4ywv-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600